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Magnesium in PDB 2rfg: Crystal Structure of Dihydrodipicolinate Synthase From Hahella Chejuensis at 1.5A Resolution

Enzymatic activity of Crystal Structure of Dihydrodipicolinate Synthase From Hahella Chejuensis at 1.5A Resolution

All present enzymatic activity of Crystal Structure of Dihydrodipicolinate Synthase From Hahella Chejuensis at 1.5A Resolution:
4.2.1.52;

Protein crystallography data

The structure of Crystal Structure of Dihydrodipicolinate Synthase From Hahella Chejuensis at 1.5A Resolution, PDB code: 2rfg was solved by B.S.Kang, M.H.Kim, G.H.Kim, K.J.Kim, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.98 / 1.50
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 67.061, 120.644, 161.137, 90.00, 90.00, 90.00
R / Rfree (%) 15.9 / 17.8

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Dihydrodipicolinate Synthase From Hahella Chejuensis at 1.5A Resolution (pdb code 2rfg). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Dihydrodipicolinate Synthase From Hahella Chejuensis at 1.5A Resolution, PDB code: 2rfg:

Magnesium binding site 1 out of 1 in 2rfg

Go back to Magnesium Binding Sites List in 2rfg
Magnesium binding site 1 out of 1 in the Crystal Structure of Dihydrodipicolinate Synthase From Hahella Chejuensis at 1.5A Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Dihydrodipicolinate Synthase From Hahella Chejuensis at 1.5A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg298

b:17.7
occ:1.00
 O A:HOH868 2.0 14.3 1.0
O A:HOH833 2.0 17.3 1.0
O A:HOH660 2.0 18.6 1.0
O A:HOH667 2.1 18.8 1.0
O A:HOH907 2.2 21.8 1.0
O B:HOH451 2.3 23.0 1.0
O A:GLY223 3.9 12.3 1.0
O B:HOH682 4.2 48.6 1.0
O A:HOH711 4.2 27.8 1.0
C A:GLY223 4.3 12.0 1.0
O A:GLN222 4.4 11.5 1.0
CA A:GLY223 4.7 11.4 1.0
O B:GLY223 4.7 13.6 1.0
O B:HOH326 4.8 15.6 1.0
O A:HOH553 4.9 15.5 1.0
N A:ASP224 4.9 11.8 1.0

Reference:

B.S.Kang, M.H.Kim, G.H.Kim, K.J.Kim. Crystal Structure of Dihydrodipicolinate Synthase From Hahella Chejuensis at 1.5A Resolution To Be Published.
Page generated: Sun Aug 10 13:46:20 2025

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