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Magnesium in PDB 2x0q: Co-Complex Structure of Alcaligin Biosynthesis Protein C (Alcc) with Atp From Bordetella Bronchiseptica

Protein crystallography data

The structure of Co-Complex Structure of Alcaligin Biosynthesis Protein C (Alcc) with Atp From Bordetella Bronchiseptica, PDB code: 2x0q was solved by S.Schmelz, G.L.Challis, J.H.Naismith, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50 / 1.96
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 94.581, 129.440, 46.484, 90.00, 90.00, 90.00
R / Rfree (%) 18.219 / 22.11

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Co-Complex Structure of Alcaligin Biosynthesis Protein C (Alcc) with Atp From Bordetella Bronchiseptica (pdb code 2x0q). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Co-Complex Structure of Alcaligin Biosynthesis Protein C (Alcc) with Atp From Bordetella Bronchiseptica, PDB code: 2x0q:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 2x0q

Go back to Magnesium Binding Sites List in 2x0q
Magnesium binding site 1 out of 2 in the Co-Complex Structure of Alcaligin Biosynthesis Protein C (Alcc) with Atp From Bordetella Bronchiseptica


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Co-Complex Structure of Alcaligin Biosynthesis Protein C (Alcc) with Atp From Bordetella Bronchiseptica within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1608

b:21.7
occ:1.00
O2B A:ATP1607 2.3 19.5 1.0
OD2 A:ASP469 2.4 22.9 1.0
OE2 A:GLU473 2.4 28.2 1.0
O2A A:ATP1607 2.6 17.5 1.0
OE1 A:GLU472 2.6 28.9 1.0
OD1 A:ASP469 2.9 21.5 1.0
CG A:ASP469 3.0 20.8 1.0
CD A:GLU472 3.3 28.0 1.0
PA A:ATP1607 3.4 19.0 1.0
PB A:ATP1607 3.4 17.9 1.0
CD A:GLU473 3.5 27.1 1.0
O3A A:ATP1607 3.5 18.0 1.0
O A:HOH2256 3.8 31.5 1.0
OE2 A:GLU472 3.9 29.1 1.0
O1A A:ATP1607 3.9 17.3 1.0
NZ A:LYS300 4.0 15.6 1.0
CG A:GLU473 4.0 24.5 1.0
CB A:GLU472 4.2 22.6 1.0
NH1 A:ARG286 4.2 27.3 1.0
CG A:GLU472 4.2 25.1 1.0
MG A:MG1609 4.3 18.4 1.0
O1B A:ATP1607 4.5 17.5 1.0
CB A:ASP469 4.5 20.1 1.0
O3B A:ATP1607 4.6 17.2 1.0
OE1 A:GLU473 4.6 28.9 1.0
O3G A:ATP1607 4.6 17.4 1.0
O5' A:ATP1607 4.9 18.9 1.0
O A:HOH2201 5.0 20.0 1.0

Magnesium binding site 2 out of 2 in 2x0q

Go back to Magnesium Binding Sites List in 2x0q
Magnesium binding site 2 out of 2 in the Co-Complex Structure of Alcaligin Biosynthesis Protein C (Alcc) with Atp From Bordetella Bronchiseptica


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Co-Complex Structure of Alcaligin Biosynthesis Protein C (Alcc) with Atp From Bordetella Bronchiseptica within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1609

b:18.4
occ:1.00
O1G A:ATP1607 2.1 16.7 1.0
OD1 A:ASN452 2.2 15.7 1.0
O1A A:ATP1607 2.4 17.3 1.0
OE1 A:GLU451 2.4 16.0 1.0
OD2 A:ASP469 2.5 22.9 1.0
O3A A:ATP1607 2.5 18.0 1.0
PA A:ATP1607 3.0 19.0 1.0
CG A:ASN452 3.2 15.1 1.0
CG A:ASP469 3.2 20.8 1.0
CD A:GLU451 3.3 16.8 1.0
PG A:ATP1607 3.3 17.3 1.0
CB A:ASP469 3.4 20.1 1.0
OE2 A:GLU451 3.5 17.9 1.0
ND2 A:ASN452 3.6 15.1 1.0
O A:HOH2256 3.6 31.5 1.0
PB A:ATP1607 3.7 17.9 1.0
O3B A:ATP1607 3.8 17.2 1.0
O3G A:ATP1607 3.9 17.4 1.0
CE1 A:HIS449 4.0 17.7 1.0
O2B A:ATP1607 4.1 19.5 1.0
O5' A:ATP1607 4.1 18.9 1.0
O2A A:ATP1607 4.1 17.5 1.0
C5' A:ATP1607 4.1 18.8 1.0
MG A:MG1608 4.3 21.7 1.0
NE2 A:HIS449 4.3 17.4 1.0
OD1 A:ASP469 4.3 21.5 1.0
CB A:ASN452 4.5 14.7 1.0
O2G A:ATP1607 4.6 17.0 1.0
CG A:GLU451 4.7 16.4 1.0
CA A:ASN452 4.8 14.7 1.0
N A:ASN452 4.9 14.5 1.0
CA A:ASP469 4.9 19.8 1.0
O A:GLU451 4.9 15.3 1.0
C A:GLU451 4.9 15.1 1.0
O1B A:ATP1607 5.0 17.5 1.0

Reference:

S.Schmelz, G.L.Challis, J.H.Naismith. Co-Complex Structure of Alcaligin Biosynthesis Protein C (Alcc) with Atp From Bordetella Bronchiseptica To Be Published.
Page generated: Wed Aug 14 06:20:52 2024

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