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Magnesium in PDB 2xdh: Non-Cellulosomal Cohesin From the Hyperthermophilic Archaeon Archaeoglobus Fulgidus

Protein crystallography data

The structure of Non-Cellulosomal Cohesin From the Hyperthermophilic Archaeon Archaeoglobus Fulgidus, PDB code: 2xdh was solved by M.Voronov-Goldman, R.Lamed, I.Noach, I.Borovok, M.Kwiat, S.Rosenheck, L.J.W.Shimon, E.A.Bayer, F.Frolow, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 25.438 / 1.96
Space group P 43 3 2
Cell size a, b, c (Å), α, β, γ (°) 101.754, 101.754, 101.754, 90.00, 90.00, 90.00
R / Rfree (%) 18.9 / 22.96

Other elements in 2xdh:

The structure of Non-Cellulosomal Cohesin From the Hyperthermophilic Archaeon Archaeoglobus Fulgidus also contains other interesting chemical elements:

Chlorine (Cl) 3 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Non-Cellulosomal Cohesin From the Hyperthermophilic Archaeon Archaeoglobus Fulgidus (pdb code 2xdh). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Non-Cellulosomal Cohesin From the Hyperthermophilic Archaeon Archaeoglobus Fulgidus, PDB code: 2xdh:

Magnesium binding site 1 out of 1 in 2xdh

Go back to Magnesium Binding Sites List in 2xdh
Magnesium binding site 1 out of 1 in the Non-Cellulosomal Cohesin From the Hyperthermophilic Archaeon Archaeoglobus Fulgidus


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Non-Cellulosomal Cohesin From the Hyperthermophilic Archaeon Archaeoglobus Fulgidus within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1669

b:0.3
occ:0.33
O A:HOH2097 2.9 68.4 1.0
CB A:ASP139 3.5 31.2 1.0
OD1 A:ASP139 3.6 47.0 1.0
CG A:ASP139 3.6 44.9 1.0
OD2 A:ASP139 4.2 56.4 1.0
CA A:ASP139 4.4 29.2 1.0
O A:ASP139 4.4 40.1 1.0
O A:HOH2043 4.7 96.4 1.0
O A:HOH2098 4.9 62.5 1.0
C A:ASP139 5.0 38.9 1.0

Reference:

M.Voronov-Goldman, R.Lamed, I.Noach, I.Borovok, M.Kwiat, S.Rosenheck, L.J.W.Shimon, E.A.Bayer, F.Frolow. Non-Cellulosomal Cohesin From the Hyperthermophilic Archaeon Archaeoglobus Fulgidus Proteins V. 79 50 2011.
ISSN: ISSN 0887-3585
PubMed: 20954171
DOI: 10.1002/PROT.22857
Page generated: Sun Aug 10 16:24:12 2025

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