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Magnesium in PDB 3fm9: Analysis of the Structural Determinants Underlying Discrimination Between Substrate and Solvent in Beta- Phosphoglucomutase Catalysis

Enzymatic activity of Analysis of the Structural Determinants Underlying Discrimination Between Substrate and Solvent in Beta- Phosphoglucomutase Catalysis

All present enzymatic activity of Analysis of the Structural Determinants Underlying Discrimination Between Substrate and Solvent in Beta- Phosphoglucomutase Catalysis:
5.4.2.6;

Protein crystallography data

The structure of Analysis of the Structural Determinants Underlying Discrimination Between Substrate and Solvent in Beta- Phosphoglucomutase Catalysis, PDB code: 3fm9 was solved by L.Finci, S.Lahiri, E.Peisach, K.N.Allen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.60 / 2.70
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 54.478, 57.656, 77.899, 90.00, 90.00, 90.00
R / Rfree (%) 20.8 / 28

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Analysis of the Structural Determinants Underlying Discrimination Between Substrate and Solvent in Beta- Phosphoglucomutase Catalysis (pdb code 3fm9). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Analysis of the Structural Determinants Underlying Discrimination Between Substrate and Solvent in Beta- Phosphoglucomutase Catalysis, PDB code: 3fm9:

Magnesium binding site 1 out of 1 in 3fm9

Go back to Magnesium Binding Sites List in 3fm9
Magnesium binding site 1 out of 1 in the Analysis of the Structural Determinants Underlying Discrimination Between Substrate and Solvent in Beta- Phosphoglucomutase Catalysis


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Analysis of the Structural Determinants Underlying Discrimination Between Substrate and Solvent in Beta- Phosphoglucomutase Catalysis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg222

b:40.2
occ:1.00
 OD2 A:ASP8 2.5 33.6 1.0
O A:ASP10 2.6 47.0 1.0
OD1 A:ASP170 2.6 37.6 1.0
OE1 A:GLU169 2.8 28.9 1.0
CG A:ASP8 3.3 33.5 1.0
CD A:GLU169 3.7 28.9 1.0
CG A:ASP170 3.7 37.6 1.0
CB A:ASP8 3.7 33.5 1.0
C A:ASP10 3.8 47.2 1.0
OE2 A:GLU169 3.8 28.6 1.0
OG A:SER171 4.2 34.5 1.0
N A:ASP170 4.3 38.2 1.0
OD2 A:ASP170 4.3 37.3 1.0
OD1 A:ASP8 4.3 33.4 1.0
CA A:GLY11 4.6 21.9 1.0
N A:GLY11 4.6 21.9 1.0
CB A:ASP10 4.7 47.4 1.0
N A:SER171 4.7 34.8 1.0
CA A:ASP10 4.7 47.5 1.0
CB A:ASP170 4.7 37.9 1.0
CG2 A:VAL12 4.7 32.0 1.0
CB A:SER171 4.9 34.7 1.0
N A:ASP10 4.9 47.5 1.0
CA A:ASP170 5.0 38.4 1.0
CG A:GLU169 5.0 29.2 1.0

Reference:

J.Dai, L.Finci, C.Zhang, S.Lahiri, G.Zhang, E.Peisach, K.N.Allen, D.Dunaway-Mariano. Analysis of the Structural Determinants Underlying Discrimination Between Substrate and Solvent in Beta-Phosphoglucomutase Catalysis. Biochemistry V. 48 1984 2009.
ISSN: ISSN 0006-2960
PubMed: 19154134
DOI: 10.1021/BI801653R
Page generated: Sun Aug 10 21:01:40 2025

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