Magnesium in PDB 3gn6: Crystal Structure of CT0912, Orfan Protein From Chlorobium Tepidum with A Ferredoxin-Like Domain Repeat (NP_661805.1) From Chlorobium Tepidum Tls at 1.80 A Resolution

The structure of Crystal Structure of CT0912, Orfan Protein From Chlorobium Tepidum with A Ferredoxin-Like Domain Repeat (NP_661805.1) From Chlorobium Tepidum Tls at 1.80 A Resolution, PDB code: 3gn6 was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	46.83 / 1.80
Space group	P 21 21 2
Cell size a, b, c (Å), α, β, γ (°)	121.268, 210.205, 57.984, 90.00, 90.00, 90.00
R / Rfree (%)	16.3 / 19.2

The binding sites of Magnesium atom in the Crystal Structure of CT0912, Orfan Protein From Chlorobium Tepidum with A Ferredoxin-Like Domain Repeat (NP_661805.1) From Chlorobium Tepidum Tls at 1.80 A Resolution (pdb code 3gn6). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 5 binding sites of Magnesium where determined in the Crystal Structure of CT0912, Orfan Protein From Chlorobium Tepidum with A Ferredoxin-Like Domain Repeat (NP_661805.1) From Chlorobium Tepidum Tls at 1.80 A Resolution, PDB code: 3gn6:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5;

Magnesium binding site 1 out of 5 in the Crystal Structure of CT0912, Orfan Protein From Chlorobium Tepidum with A Ferredoxin-Like Domain Repeat (NP_661805.1) From Chlorobium Tepidum Tls at 1.80 A Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of CT0912, Orfan Protein From Chlorobium Tepidum with A Ferredoxin-Like Domain Repeat (NP_661805.1) From Chlorobium Tepidum Tls at 1.80 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg321 b:15.0 occ:1.00 O A:HOH417 2.0 16.0 1.0 OE1 A:GLU308 2.1 16.0 1.0 NE2 A:HIS282 2.1 11.6 1.0 NE2 A:HIS286 2.1 16.4 1.0 O A:HOH330 2.2 13.7 1.0 OE2 A:GLU308 2.2 6.1 1.0 CD A:GLU308 2.5 17.4 1.0 CE1 A:HIS282 3.0 12.9 1.0 CE1 A:HIS286 3.1 15.9 1.0 CD2 A:HIS286 3.2 14.8 1.0 CD2 A:HIS282 3.2 12.9 1.0 CG A:GLU308 4.0 14.9 1.0 O A:HOH343 4.0 17.6 1.0 O A:HOH338 4.1 16.1 1.0 O A:HOH651 4.1 21.3 1.0 ND1 A:HIS282 4.2 9.5 1.0 ND1 A:HIS286 4.2 13.1 1.0 O A:HOH375 4.2 14.7 1.0 CG A:HIS282 4.3 12.7 1.0 CG A:HIS286 4.3 18.6 1.0 CG2 A:VAL87 4.6 11.8 1.0 CG2 A:VAL200 4.7 13.2 1.0 O3 A:GOL323 4.8 42.8 1.0 CB A:VAL87 4.8 15.6 1.0 CB A:GLU308 4.9 13.9 1.0 ND2 A:ASN202 4.9 27.9 1.0

Magnesium binding site 2 out of 5 in the Crystal Structure of CT0912, Orfan Protein From Chlorobium Tepidum with A Ferredoxin-Like Domain Repeat (NP_661805.1) From Chlorobium Tepidum Tls at 1.80 A Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of CT0912, Orfan Protein From Chlorobium Tepidum with A Ferredoxin-Like Domain Repeat (NP_661805.1) From Chlorobium Tepidum Tls at 1.80 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg322 b:29.5 occ:1.00 O A:HOH337 2.1 14.1 1.0 O A:HOH575 2.1 18.1 1.0 O A:HOH342 2.1 14.8 1.0 O A:HOH341 2.2 14.2 1.0 OD1 A:ASP320 2.2 17.9 1.0 O A:HOH528 2.2 15.3 1.0 CG A:ASP320 3.2 23.4 1.0 OD2 A:ASP320 3.5 14.0 1.0 O A:VAL68 3.8 19.0 1.0 C A:VAL68 4.1 19.3 1.0 O A:ARG67 4.1 19.2 1.0 O A:HOH608 4.1 31.5 1.0 O A:LEU69 4.2 19.4 1.0 O A:ASP320 4.2 25.6 1.0 O A:HOH652 4.3 20.5 1.0 CA A:VAL68 4.3 20.8 1.0 C A:ASP320 4.6 26.8 1.0 CB A:ASP320 4.6 24.9 1.0 C A:LEU69 4.7 18.3 1.0 N A:ASP320 4.7 21.7 1.0 O A:HOH465 4.8 26.6 1.0 N A:LEU69 4.9 18.7 1.0 CA A:ASP320 4.9 24.6 1.0

Magnesium binding site 3 out of 5 in the Crystal Structure of CT0912, Orfan Protein From Chlorobium Tepidum with A Ferredoxin-Like Domain Repeat (NP_661805.1) From Chlorobium Tepidum Tls at 1.80 A Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Crystal Structure of CT0912, Orfan Protein From Chlorobium Tepidum with A Ferredoxin-Like Domain Repeat (NP_661805.1) From Chlorobium Tepidum Tls at 1.80 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg321 b:14.2 occ:1.00 O B:HOH399 2.0 15.3 1.0 OE1 B:GLU308 2.0 15.7 1.0 NE2 B:HIS286 2.2 9.7 1.0 NE2 B:HIS282 2.2 12.4 1.0 OE2 B:GLU308 2.2 5.4 1.0 O B:HOH337 2.3 18.5 1.0 CD B:GLU308 2.4 16.0 1.0 CE1 B:HIS286 3.1 11.8 1.0 CE1 B:HIS282 3.2 14.7 1.0 CD2 B:HIS282 3.2 14.2 1.0 CD2 B:HIS286 3.2 15.6 1.0 O B:HOH473 3.9 16.9 1.0 CG B:GLU308 4.0 14.8 1.0 O B:HOH335 4.1 16.4 1.0 O B:HOH500 4.2 17.8 1.0 ND1 B:HIS286 4.2 15.2 1.0 ND1 B:HIS282 4.3 11.1 1.0 O B:HOH509 4.3 18.1 1.0 CG B:HIS282 4.3 13.4 1.0 CG B:HIS286 4.3 16.8 1.0 CG2 B:VAL87 4.5 15.8 1.0 OD1 B:ASN202 4.6 34.9 0.5 CG2 B:VAL200 4.7 11.6 1.0 CB B:VAL87 4.8 15.6 1.0 ND2 B:ASN202 4.8 15.8 0.5 CB B:GLU308 4.8 13.1 1.0 O1 B:GOL323 5.0 31.0 1.0

Magnesium binding site 4 out of 5 in the Crystal Structure of CT0912, Orfan Protein From Chlorobium Tepidum with A Ferredoxin-Like Domain Repeat (NP_661805.1) From Chlorobium Tepidum Tls at 1.80 A Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Crystal Structure of CT0912, Orfan Protein From Chlorobium Tepidum with A Ferredoxin-Like Domain Repeat (NP_661805.1) From Chlorobium Tepidum Tls at 1.80 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ C:Mg321 b:13.1 occ:1.00 O C:HOH339 2.0 13.4 1.0 O C:HOH372 2.0 14.1 1.0 OE1 C:GLU308 2.1 14.2 1.0 NE2 C:HIS282 2.1 12.2 1.0 NE2 C:HIS286 2.2 14.7 1.0 OE2 C:GLU308 2.2 4.6 1.0 CD C:GLU308 2.4 14.3 1.0 CE1 C:HIS282 3.0 14.1 1.0 CE1 C:HIS286 3.1 15.0 1.0 CD2 C:HIS282 3.2 12.0 1.0 CD2 C:HIS286 3.2 10.2 1.0 CG C:GLU308 4.0 13.1 1.0 O C:HOH379 4.0 14.5 1.0 O C:HOH355 4.1 13.3 1.0 O C:HOH510 4.1 17.1 1.0 ND1 C:HIS282 4.2 13.5 1.0 ND1 C:HIS286 4.3 14.1 1.0 CG C:HIS282 4.3 15.9 1.0 CG C:HIS286 4.3 14.9 1.0 O C:HOH387 4.4 14.8 1.0 CG2 C:VAL87 4.6 14.6 1.0 CG2 C:VAL200 4.7 11.1 1.0 ND2 C:ASN202 4.7 14.5 0.7 O3 C:GOL323 4.8 45.5 1.0 CB C:VAL87 4.8 14.3 1.0 CB C:GLU308 4.8 13.4 1.0

Magnesium binding site 5 out of 5 in the Crystal Structure of CT0912, Orfan Protein From Chlorobium Tepidum with A Ferredoxin-Like Domain Repeat (NP_661805.1) From Chlorobium Tepidum Tls at 1.80 A Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Crystal Structure of CT0912, Orfan Protein From Chlorobium Tepidum with A Ferredoxin-Like Domain Repeat (NP_661805.1) From Chlorobium Tepidum Tls at 1.80 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ D:Mg321 b:13.5 occ:1.00 O D:HOH395 2.0 15.9 1.0 OE1 D:GLU308 2.1 15.2 1.0 NE2 D:HIS282 2.1 10.1 1.0 NE2 D:HIS286 2.2 12.8 1.0 OE2 D:GLU308 2.2 6.0 1.0 O D:HOH531 2.2 18.5 1.0 CD D:GLU308 2.4 13.6 1.0 CE1 D:HIS282 3.1 15.9 1.0 CE1 D:HIS286 3.1 13.3 1.0 CD2 D:HIS282 3.2 12.0 1.0 CD2 D:HIS286 3.2 13.4 1.0 CG D:GLU308 3.9 15.7 1.0 O D:HOH385 4.1 15.3 1.0 O D:HOH588 4.2 19.2 1.0 O D:HOH448 4.2 16.6 1.0 ND1 D:HIS282 4.2 12.1 1.0 ND1 D:HIS286 4.3 13.2 1.0 CG D:HIS282 4.3 12.2 1.0 O D:HOH412 4.3 16.3 1.0 CG D:HIS286 4.3 16.0 1.0 ND2 D:ASN202 4.5 6.6 0.5 CG2 D:VAL87 4.6 15.5 1.0 CG2 D:VAL200 4.7 14.7 1.0 CB D:VAL87 4.7 13.8 1.0 CB D:GLU308 4.8 14.5 1.0 O3 D:GOL322 4.9 43.8 1.0

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.