Magnesium in PDB 3j16: Models of Ribosome-Bound DOM34P and RLI1P and Their Ribosomal Binding Partners

The structure of Models of Ribosome-Bound DOM34P and RLI1P and Their Ribosomal Binding Partners also contains other interesting chemical elements:

Iron

(Fe)

8 atoms

The binding sites of Magnesium atom in the Models of Ribosome-Bound DOM34P and RLI1P and Their Ribosomal Binding Partners (pdb code 3j16). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Models of Ribosome-Bound DOM34P and RLI1P and Their Ribosomal Binding Partners, PDB code: 3j16:

Magnesium binding site 1 out of 1 in the Models of Ribosome-Bound DOM34P and RLI1P and Their Ribosomal Binding Partners


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Models of Ribosome-Bound DOM34P and RLI1P and Their Ribosomal Binding Partners within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg701 b:43.9 occ:1.00 OG B:SER117 1.1 0.0 1.0 O1B B:ATP702 2.2 42.4 1.0 CB B:SER117 2.5 0.0 1.0 O2G B:ATP702 2.7 46.4 1.0 OE1 B:GLN171 3.3 0.0 1.0 CD B:GLN171 3.3 0.0 1.0 CA B:SER117 3.3 0.0 1.0 PB B:ATP702 3.4 44.2 1.0 N B:SER117 3.5 0.0 1.0 OE2 B:GLU247 3.5 0.0 1.0 CE B:LYS116 3.6 0.0 1.0 CG B:GLN171 3.7 0.0 1.0 NE2 B:GLN171 3.7 0.0 1.0 PG B:ATP702 3.8 47.6 1.0 CG B:LYS116 3.9 0.0 1.0 O3B B:ATP702 4.0 45.4 1.0 O3A B:ATP702 4.0 53.3 1.0 CD B:LYS116 4.0 0.0 1.0 OD2 B:ASP246 4.0 0.0 1.0 O1A B:ATP702 4.1 56.3 1.0 CB B:GLN171 4.3 0.0 1.0 PA B:ATP702 4.3 57.0 1.0 O3G B:ATP702 4.3 49.2 1.0 NZ B:LYS116 4.5 0.0 1.0 C B:LYS116 4.6 0.0 1.0 OD1 B:ASP246 4.6 0.0 1.0 CD B:GLU247 4.7 0.0 1.0 CG B:ASP246 4.7 0.0 1.0 O2B B:ATP702 4.7 38.1 1.0 C B:SER117 4.7 0.0 1.0

T.Becker, S.Franckenberg, S.Wickles, C.J.Shoemaker, A.M.Anger, J.-P.Armache, H.Sieber, C.Ungewickell, O.Berninghausen, I.Daberkow, A.Karcher, M.Thomm, K.P.Hopfner, R.Green, R.Beckmann. Structural Basis of Highly Conserved Ribosome Recycling in Eukaryotes and Archaea. Nature V. 482 501 2012.
ISSN: ISSN 0028-0836
PubMed: 22358840
DOI: 10.1038/NATURE10829