Magnesium in PDB 3ktc: Crystal Structure of Putative Sugar Isomerase (YP_050048.1) From Erwinia Carotovora Atroseptica SCRI1043 at 1.54 A Resolution

Enzymatic activity of Crystal Structure of Putative Sugar Isomerase (YP_050048.1) From Erwinia Carotovora Atroseptica SCRI1043 at 1.54 A Resolution

All present enzymatic activity of Crystal Structure of Putative Sugar Isomerase (YP_050048.1) From Erwinia Carotovora Atroseptica SCRI1043 at 1.54 A Resolution:
5.3.1.5;

Protein crystallography data

The structure of Crystal Structure of Putative Sugar Isomerase (YP_050048.1) From Erwinia Carotovora Atroseptica SCRI1043 at 1.54 A Resolution, PDB code: 3ktc was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

*Resolution Low / High (Å)*	29.32 / 1.54
*Space group*	P 3₁ 2 1
*Cell size a, b, c (Å), α, β, γ (°)*	79.653, 79.653, 194.406, 90.00, 90.00, 120.00
*R / R_free (%)*	13.6 / 15.7

Other elements in 3ktc:

The structure of Crystal Structure of Putative Sugar Isomerase (YP_050048.1) From Erwinia Carotovora Atroseptica SCRI1043 at 1.54 A Resolution also contains other interesting chemical elements:

Iron	(Fe)	6 atoms
Chlorine	(Cl)	2 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Putative Sugar Isomerase (YP_050048.1) From Erwinia Carotovora Atroseptica SCRI1043 at 1.54 A Resolution (pdb code 3ktc). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of Putative Sugar Isomerase (YP_050048.1) From Erwinia Carotovora Atroseptica SCRI1043 at 1.54 A Resolution, PDB code: 3ktc:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 3ktc

Go back to

Magnesium Binding Sites List in 3ktc

Magnesium binding site 1 out of 2 in the Crystal Structure of Putative Sugar Isomerase (YP_050048.1) From Erwinia Carotovora Atroseptica SCRI1043 at 1.54 A Resolution

Mono view

Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Putative Sugar Isomerase (YP_050048.1) From Erwinia Carotovora Atroseptica SCRI1043 at 1.54 A Resolution within 5.0Å range:

probe	atom	residue	distance (Å)	B	Occ
A:Mg335 b:30.4 occ:1.00	O	A:HOH511	2.0	23.6	1.0
	O	A:HOH528	2.3	24.8	1.0
	O	A:HOH531	2.9	25.3	1.0
	O1	A:UNL338	3.6	18.6	0.5
	O	A:HOH599	3.8	29.6	1.0
	O	A:HOH367	4.0	15.8	1.0
	O	A:HOH385	4.1	17.1	1.0
	O	A:HOH584	4.2	44.2	1.0
	O	A:ASP297	4.3	22.3	0.7
	O	A:HOH400	4.3	18.2	0.5
	O	A:ASP297	4.5	23.7	0.3
	O2	A:UNL338	4.6	20.0	0.5
	OD1	A:ASP297	4.7	32.9	0.7
	O3	A:UNL338	4.7	18.7	0.5

Magnesium binding site 2 out of 2 in 3ktc

Go back to

Magnesium Binding Sites List in 3ktc

Magnesium binding site 2 out of 2 in the Crystal Structure of Putative Sugar Isomerase (YP_050048.1) From Erwinia Carotovora Atroseptica SCRI1043 at 1.54 A Resolution

Mono view

Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of Putative Sugar Isomerase (YP_050048.1) From Erwinia Carotovora Atroseptica SCRI1043 at 1.54 A Resolution within 5.0Å range:

probe	atom	residue	distance (Å)	B	Occ
B:Mg335 b:14.6 occ:0.50	O	B:HOH402	2.1	16.4	1.0
	O	B:HOH405	2.2	16.4	0.5
	O	B:HOH363	2.2	14.7	0.5
	O	B:HOH434	2.4	17.6	1.0
	O	B:HOH484	4.1	21.1	1.0
	OD2	B:ASP153	4.1	26.4	1.0
	O	B:HOH508	4.2	40.4	1.0
	O	B:HOH454	4.2	19.7	1.0
	OD1	B:ASP153	4.2	24.7	1.0
	O	B:HOH671	4.5	30.4	1.0
	CG	B:ASP153	4.6	25.7	1.0
	CB	B:ASP149	4.7	24.6	1.0
	OD2	B:ASP149	4.8	27.7	1.0

Reference:

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.

Page generated: Wed Aug 14 18:16:16 2024

Last articles

Fe in 2YXO
Fe in 2YRS
Fe in 2YXC
Fe in 2YNM
Fe in 2YVJ
Fe in 2YP1
Fe in 2YU2
Fe in 2YU1
Fe in 2YQB
Fe in 2YOO

	© Copyright 2008-2020 by atomistry.com
Home \| Site Map \| Copyright \| Contact us \| Privacy