Atomistry » Magnesium » PDB 3l9b-3lop » 3lac
Atomistry »
  Magnesium »
    PDB 3l9b-3lop »
      3lac »

Magnesium in PDB 3lac: Crystal Structure of Bacillus Anthracis Pyrrolidone-Carboxylate Peptidase, Pcp

Enzymatic activity of Crystal Structure of Bacillus Anthracis Pyrrolidone-Carboxylate Peptidase, Pcp

All present enzymatic activity of Crystal Structure of Bacillus Anthracis Pyrrolidone-Carboxylate Peptidase, Pcp:
3.4.19.3;

Protein crystallography data

The structure of Crystal Structure of Bacillus Anthracis Pyrrolidone-Carboxylate Peptidase, Pcp, PDB code: 3lac was solved by S.M.Anderson, Z.Wawrzak, O.Onopriyenko, J.Hasseman, A.Edwards, A.Savchenko, W.F.Anderson, Center For Structural Genomics Ofinfectious Diseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 34.30 / 2.00
Space group P 43 2 2
Cell size a, b, c (Å), α, β, γ (°) 78.550, 78.550, 141.040, 90.00, 90.00, 90.00
R / Rfree (%) 18.1 / 22.3

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Bacillus Anthracis Pyrrolidone-Carboxylate Peptidase, Pcp (pdb code 3lac). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of Bacillus Anthracis Pyrrolidone-Carboxylate Peptidase, Pcp, PDB code: 3lac:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 3lac

Go back to Magnesium Binding Sites List in 3lac
Magnesium binding site 1 out of 2 in the Crystal Structure of Bacillus Anthracis Pyrrolidone-Carboxylate Peptidase, Pcp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Bacillus Anthracis Pyrrolidone-Carboxylate Peptidase, Pcp within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg216

b:27.9
occ:1.00
O B:HOH377 2.6 29.5 1.0
N B:VAL134 3.0 5.7 1.0
O B:HOH323 3.1 22.1 1.0
CA B:SER133 3.5 5.2 1.0
CB B:SER133 3.7 4.8 1.0
C B:SER133 3.7 5.9 1.0
CG2 B:VAL134 4.0 5.5 1.0
CB B:VAL134 4.0 5.9 1.0
CA B:VAL134 4.1 7.0 1.0
O B:HOH268 4.2 45.2 1.0
CG1 B:VAL122 4.3 8.0 1.0
O B:VAL134 4.4 5.2 1.0
O A:HOH229 4.7 33.6 1.0
C B:VAL134 4.7 6.6 1.0
N B:SER133 4.8 3.6 1.0
O B:ALA132 4.8 4.9 1.0
O B:SER133 4.9 5.1 1.0
CG2 B:VAL122 4.9 2.7 1.0
OG B:SER133 4.9 6.6 1.0
O B:HOH373 5.0 43.3 1.0
O A:HOH312 5.0 28.8 1.0

Magnesium binding site 2 out of 2 in 3lac

Go back to Magnesium Binding Sites List in 3lac
Magnesium binding site 2 out of 2 in the Crystal Structure of Bacillus Anthracis Pyrrolidone-Carboxylate Peptidase, Pcp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of Bacillus Anthracis Pyrrolidone-Carboxylate Peptidase, Pcp within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg217

b:24.9
occ:1.00
O B:PRO75 2.7 10.6 1.0
O B:SER183 2.7 5.4 1.0
C B:PRO75 3.5 8.5 1.0
CA B:PRO75 3.6 6.9 1.0
N B:SER183 3.6 8.6 1.0
CB B:PRO182 3.7 4.2 1.0
C B:SER183 3.8 5.4 1.0
CB B:PRO75 4.0 7.3 1.0
CA B:SER183 4.3 4.7 1.0
C B:PRO182 4.4 6.5 1.0
CA B:PRO182 4.4 5.3 1.0
N B:ASP76 4.8 8.3 1.0
N B:MSE184 4.8 5.6 1.0
CG B:PRO182 4.9 7.4 1.0

Reference:

S.M.Anderson, Z.Wawrzak, O.Onopriyenko, J.Hasseman, A.Edwards, A.Savchenko, W.F.Anderson, Center For Structural Genomics Of Infectious Diseases(Csgid). Crystal Structure of Bacillus Anthracis Pyrrolidone-Carboxylate Peptidase, Pcp To Be Published.
Page generated: Wed Aug 14 18:29:08 2024

Last articles

Mg in 2VSC
Mg in 2VPN
Mg in 2VRN
Mg in 2VPQ
Mg in 2VQD
Mg in 2VQ2
Mg in 2VPR
Mg in 2VPO
Mg in 2VP0
Mg in 2VOS
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy