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Magnesium in PDB 3m8s: Crystal Structure of the Large Fragment of Dna Polymerase I From Thermus Aquaticus in A Closed Ternary Complex with Trapped 4'- Methylated Dttp
Enzymatic activity of Crystal Structure of the Large Fragment of Dna Polymerase I From Thermus Aquaticus in A Closed Ternary Complex with Trapped 4'- Methylated Dttp
All present enzymatic activity of Crystal Structure of the Large Fragment of Dna Polymerase I From Thermus Aquaticus in A Closed Ternary Complex with Trapped 4'- Methylated Dttp:
2.7.7.7;
2.7.7.7;
Protein crystallography data
The structure of Crystal Structure of the Large Fragment of Dna Polymerase I From Thermus Aquaticus in A Closed Ternary Complex with Trapped 4'- Methylated Dttp, PDB code: 3m8s
was solved by
K.Diederichs,
A.Marx,
K.Betz,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 47.09 / 2.20 |
| Space group | P 31 2 1 |
| Cell size a, b, c (Å), α, β, γ (°) | 108.742, 108.742, 90.755, 90.00, 90.00, 120.00 |
| R / Rfree (%) | 17 / 22.4 |
Magnesium Binding Sites:
The binding sites of Magnesium atom in the Crystal Structure of the Large Fragment of Dna Polymerase I From Thermus Aquaticus in A Closed Ternary Complex with Trapped 4'- Methylated Dttp
(pdb code 3m8s). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of the Large Fragment of Dna Polymerase I From Thermus Aquaticus in A Closed Ternary Complex with Trapped 4'- Methylated Dttp, PDB code: 3m8s:
Jump to Magnesium binding site number: 1; 2;
In total 2 binding sites of Magnesium where determined in the Crystal Structure of the Large Fragment of Dna Polymerase I From Thermus Aquaticus in A Closed Ternary Complex with Trapped 4'- Methylated Dttp, PDB code: 3m8s:
Jump to Magnesium binding site number: 1; 2;
Magnesium binding site 1 out of 2 in 3m8s
Go back to
Magnesium Binding Sites List in 3m8s
Magnesium binding site 1 out
of 2 in the Crystal Structure of the Large Fragment of Dna Polymerase I From Thermus Aquaticus in A Closed Ternary Complex with Trapped 4'- Methylated Dttp
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Crystal Structure of the Large Fragment of Dna Polymerase I From Thermus Aquaticus in A Closed Ternary Complex with Trapped 4'- Methylated Dttp within 5.0Å range:
|
Magnesium binding site 2 out of 2 in 3m8s
Go back to
Magnesium Binding Sites List in 3m8s
Magnesium binding site 2 out
of 2 in the Crystal Structure of the Large Fragment of Dna Polymerase I From Thermus Aquaticus in A Closed Ternary Complex with Trapped 4'- Methylated Dttp
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Crystal Structure of the Large Fragment of Dna Polymerase I From Thermus Aquaticus in A Closed Ternary Complex with Trapped 4'- Methylated Dttp within 5.0Å range:
|
Reference:
K.Betz,
F.Streckenbach,
A.Schnur,
T.Exner,
W.Welte,
K.Diederichs,
A.Marx.
Structures of Dna Polymerases Caught Processing Size-Augmented Nucleotide Probes. Angew.Chem.Int.Ed.Engl. V. 49 5181 2010.
ISSN: ISSN 1433-7851
PubMed: 20572212
DOI: 10.1002/ANIE.200905724
Page generated: Mon Aug 11 00:30:27 2025
ISSN: ISSN 1433-7851
PubMed: 20572212
DOI: 10.1002/ANIE.200905724
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