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Magnesium in PDB 3oie: Crystal Structure of the DB1880-D(Cgcgaattcgcg)2 Complex

Protein crystallography data

The structure of Crystal Structure of the DB1880-D(Cgcgaattcgcg)2 Complex, PDB code: 3oie was solved by S.Lin, S.Neidle, N.Campbell, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 22.66 / 1.90
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 24.114, 38.417, 66.205, 90.00, 90.00, 90.00
R / Rfree (%) 16.3 / 24.1

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of the DB1880-D(Cgcgaattcgcg)2 Complex (pdb code 3oie). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of the DB1880-D(Cgcgaattcgcg)2 Complex, PDB code: 3oie:

Magnesium binding site 1 out of 1 in 3oie

Go back to Magnesium Binding Sites List in 3oie
Magnesium binding site 1 out of 1 in the Crystal Structure of the DB1880-D(Cgcgaattcgcg)2 Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of the DB1880-D(Cgcgaattcgcg)2 Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg13

b:35.4
occ:1.00
O B:HOH38 2.0 37.5 1.0
O A:HOH24 2.0 22.2 1.0
O A:HOH26 2.1 27.9 1.0
O B:HOH39 2.2 38.5 1.0
O A:HOH27 2.2 27.8 1.0
O B:HOH27 2.3 16.5 1.0
O B:HOH31 4.2 27.7 1.0
O B:HOH28 4.3 19.6 1.0
O B:HOH6 4.4 21.6 1.0
O6 A:DG2 4.4 13.9 1.0
O6 B:DG22 4.4 15.8 1.0
O A:HOH59 4.5 37.4 1.0
N7 A:DG2 4.5 17.0 1.0
O B:HOH77 4.6 33.0 1.0
C2' A:DC1 4.8 22.0 1.0
C6 A:DC1 5.0 28.4 1.0

Reference:

S.Lin, S.Neidle, N.Campbell. Crystal Structure of the DB1880-D(Cgcgaattcgcg)2 Complex To Be Published.
Page generated: Mon Aug 11 01:13:09 2025

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