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Magnesium in PDB 3opk: Crystal Structure of Divalent-Cation Tolerance Protein Cuta From Salmonella Enterica Subsp. Enterica Serovar Typhimurium Str. LT2

Protein crystallography data

The structure of Crystal Structure of Divalent-Cation Tolerance Protein Cuta From Salmonella Enterica Subsp. Enterica Serovar Typhimurium Str. LT2, PDB code: 3opk was solved by B.Nocek, R.Mulligan, L.Papazisi, W.Anderson, A.Joachimiak, Center Forstructural Genomics Of Infectious Diseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 1.90
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 62.333, 107.925, 52.177, 90.00, 90.00, 90.00
R / Rfree (%) 17.5 / 21.9

Other elements in 3opk:

The structure of Crystal Structure of Divalent-Cation Tolerance Protein Cuta From Salmonella Enterica Subsp. Enterica Serovar Typhimurium Str. LT2 also contains other interesting chemical elements:

Sodium (Na) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Divalent-Cation Tolerance Protein Cuta From Salmonella Enterica Subsp. Enterica Serovar Typhimurium Str. LT2 (pdb code 3opk). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Divalent-Cation Tolerance Protein Cuta From Salmonella Enterica Subsp. Enterica Serovar Typhimurium Str. LT2, PDB code: 3opk:

Magnesium binding site 1 out of 1 in 3opk

Go back to Magnesium Binding Sites List in 3opk
Magnesium binding site 1 out of 1 in the Crystal Structure of Divalent-Cation Tolerance Protein Cuta From Salmonella Enterica Subsp. Enterica Serovar Typhimurium Str. LT2


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Divalent-Cation Tolerance Protein Cuta From Salmonella Enterica Subsp. Enterica Serovar Typhimurium Str. LT2 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg401

b:7.5
occ:1.00
O C:VAL99 2.1 23.5 1.0
OE1 B:GLN7 2.1 24.4 1.0
O C:PRO12 2.1 23.7 1.0
O C:ALA14 2.2 23.5 1.0
CD B:GLN7 3.1 24.3 1.0
C C:VAL99 3.2 23.5 1.0
C C:PRO12 3.2 23.6 1.0
N C:VAL99 3.3 23.3 1.0
C C:ALA14 3.4 23.4 1.0
NE2 B:GLN7 3.5 24.5 1.0
CA C:VAL99 3.6 23.4 1.0
N C:ALA14 3.7 23.6 1.0
CB C:VAL99 3.8 23.3 1.0
C C:GLU13 3.9 23.8 1.0
CB C:PRO12 4.0 23.6 1.0
CA C:PRO12 4.0 23.6 1.0
CA C:ALA14 4.1 23.5 1.0
N C:PRO12 4.1 23.6 1.0
O C:GLU13 4.2 23.9 1.0
N C:GLU13 4.2 23.9 1.0
C C:PRO98 4.2 23.4 1.0
CD C:PRO12 4.3 23.7 1.0
CA C:GLU13 4.3 24.1 0.5
N C:THR100 4.4 23.7 1.0
CA C:GLU13 4.4 24.1 0.5
CG B:GLN7 4.4 24.0 1.0
CG1 C:VAL15 4.5 24.1 1.0
CA C:PRO98 4.5 23.4 1.0
N C:VAL15 4.5 23.4 1.0
CD1 C:ILE11 4.6 25.3 1.0
CG1 C:ILE11 4.6 24.7 1.0
CB C:ILE11 4.6 24.4 1.0
CB C:ALA14 4.6 23.6 1.0
CG1 C:VAL99 4.6 23.4 1.0
C C:ILE11 4.7 23.8 1.0
CB C:PRO98 4.7 23.5 1.0
CG C:PRO12 4.8 23.8 1.0
CA C:THR100 4.8 23.9 1.0
CA C:VAL15 4.9 23.6 1.0
CG2 C:VAL99 4.9 23.3 1.0

Reference:

B.Nocek, R.Mulligan, L.Papazisi, W.Anderson, A.Joachimiak. Crystal Structure of Divalent-Cation Tolerance Protein Cuta From Salmonella Enterica Subsp. Enterica Serovar Typhimurium Str. LT2 To Be Published.
Page generated: Mon Aug 11 01:15:35 2025

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