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Magnesium in PDB 3rs7: H-Ras Soaked in 50% Isopropanol: 1 of 10 in Mscs Set

Protein crystallography data

The structure of H-Ras Soaked in 50% Isopropanol: 1 of 10 in Mscs Set, PDB code: 3rs7 was solved by C.Mattos, G.Buhrman, B.Kearney, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.47 / 1.70
Space group H 3 2
Cell size a, b, c (Å), α, β, γ (°) 89.403, 89.403, 135.245, 90.00, 90.00, 120.00
R / Rfree (%) 18.1 / 20.8

Other elements in 3rs7:

The structure of H-Ras Soaked in 50% Isopropanol: 1 of 10 in Mscs Set also contains other interesting chemical elements:

Calcium (Ca) 2 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the H-Ras Soaked in 50% Isopropanol: 1 of 10 in Mscs Set (pdb code 3rs7). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the H-Ras Soaked in 50% Isopropanol: 1 of 10 in Mscs Set, PDB code: 3rs7:

Magnesium binding site 1 out of 1 in 3rs7

Go back to Magnesium Binding Sites List in 3rs7
Magnesium binding site 1 out of 1 in the H-Ras Soaked in 50% Isopropanol: 1 of 10 in Mscs Set


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of H-Ras Soaked in 50% Isopropanol: 1 of 10 in Mscs Set within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg192

b:15.4
occ:1.00
O2G A:GNP190 2.1 16.1 1.0
O2B A:GNP190 2.1 13.6 1.0
O A:HOH303 2.1 13.4 1.0
OG A:SER17 2.1 13.7 1.0
OG1 A:THR35 2.2 15.0 1.0
O A:HOH301 2.2 14.9 1.0
CB A:THR35 3.2 14.3 1.0
CB A:SER17 3.2 14.7 1.0
PB A:GNP190 3.2 14.5 1.0
PG A:GNP190 3.2 15.4 1.0
N3B A:GNP190 3.3 13.3 1.0
N A:SER17 3.8 11.8 1.0
N A:THR35 3.9 15.2 1.0
OD2 A:ASP57 4.1 19.1 1.0
CA A:SER17 4.1 12.3 1.0
O3G A:GNP190 4.1 17.8 1.0
OD1 A:ASP57 4.1 16.2 1.0
O2A A:GNP190 4.1 15.3 1.0
CA A:THR35 4.1 16.8 1.0
O A:HOH348 4.2 18.7 1.0
O3A A:GNP190 4.2 11.8 1.0
CG2 A:THR35 4.2 16.1 1.0
O1B A:GNP190 4.3 14.2 1.0
O1G A:GNP190 4.4 16.3 1.0
O A:ASP33 4.5 15.3 1.0
CG A:ASP57 4.5 14.9 1.0
PA A:GNP190 4.5 13.9 1.0
O A:THR58 4.6 18.5 1.0
O1A A:GNP190 4.7 14.3 1.0
CB A:LYS16 4.8 13.2 1.0
C A:PRO34 4.8 16.2 1.0
C A:LYS16 4.9 13.6 1.0

Reference:

G.Buhrman, C.O Connor, B.Zerbe, B.M.Kearney, R.Napoleon, E.A.Kovrigina, S.Vajda, D.Kozakov, E.L.Kovrigin, C.Mattos. Analysis of Binding Site Hot Spots on the Surface of Ras Gtpase. J.Mol.Biol. V. 413 773 2011.
ISSN: ISSN 0022-2836
PubMed: 21945529
DOI: 10.1016/J.JMB.2011.09.011
Page generated: Thu Aug 15 10:37:33 2024

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