Magnesium in PDB 3slb: Crystal Structure of BA2930 in Complex with Accoa and Cytosine

All present enzymatic activity of Crystal Structure of BA2930 in Complex with Accoa and Cytosine:
2.3.1.81;

The structure of Crystal Structure of BA2930 in Complex with Accoa and Cytosine, PDB code: 3slb was solved by M.M.Klimecka, M.Chruszcz, P.J.Porebski, M.Cymborowski, W.Anderson, W.Minor, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	23.99 / 2.00
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	72.473, 110.630, 73.780, 90.00, 112.24, 90.00
R / Rfree (%)	17.4 / 23

The binding sites of Magnesium atom in the Crystal Structure of BA2930 in Complex with Accoa and Cytosine (pdb code 3slb). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 4 binding sites of Magnesium where determined in the Crystal Structure of BA2930 in Complex with Accoa and Cytosine, PDB code: 3slb:
Jump to Magnesium binding site number: 1; 2; 3; 4;

Magnesium binding site 1 out of 4 in the Crystal Structure of BA2930 in Complex with Accoa and Cytosine


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of BA2930 in Complex with Accoa and Cytosine within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg268 b:34.7 occ:1.00 O B:HOH724 2.0 35.9 1.0 O B:HOH506 2.0 33.6 1.0 O B:HOH514 2.1 39.1 1.0 O B:HOH657 2.1 47.3 1.0 OE2 B:GLU53 3.8 27.7 1.0 OE1 B:GLU53 3.9 25.1 1.0 O A:HOH323 4.3 45.1 1.0 OE1 A:GLU101 4.3 41.7 1.0 CD B:GLU53 4.3 25.5 1.0 O B:HOH656 4.4 37.0 1.0 OE2 A:GLU101 4.9 39.4 1.0 CD A:GLU101 4.9 36.9 1.0

Magnesium binding site 2 out of 4 in the Crystal Structure of BA2930 in Complex with Accoa and Cytosine


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of BA2930 in Complex with Accoa and Cytosine within 5.0Å range: probe atom residue distance (Å) B Occ D:Mg268 b:38.8 occ:1.00 O B:HOH723 1.8 42.3 1.0 O D:HOH587 2.0 38.8 1.0 O D:HOH586 2.1 48.0 1.0 O D:HOH333 2.2 24.9 1.0 O D:HOH585 2.2 26.7 1.0 O D:ARG118 4.2 21.7 1.0 CA D:THR119 4.2 23.0 1.0 O D:THR119 4.2 23.8 1.0 ND1 D:HIS103 4.3 28.0 1.0 C D:THR119 4.4 23.2 1.0 O B:HOH365 4.6 32.4 1.0 N B:SER-2 4.6 44.0 1.0 O D:HOH294 4.7 23.8 1.0 O D:TYR120 4.7 21.9 1.0 O D:HOH317 4.9 27.3 1.0 CB D:THR119 5.0 24.5 1.0 O D:HIS103 5.0 23.8 1.0

Magnesium binding site 3 out of 4 in the Crystal Structure of BA2930 in Complex with Accoa and Cytosine


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Crystal Structure of BA2930 in Complex with Accoa and Cytosine within 5.0Å range: probe atom residue distance (Å) B Occ D:Mg270 b:45.7 occ:1.00 O B:HOH720 1.9 37.9 1.0 O C:HOH722 2.0 46.6 1.0 O C:HOH721 2.0 49.9 1.0 O D:HOH617 2.0 40.0 1.0 O D:HOH328 2.2 31.2 1.0 OE2 D:GLU53 4.2 26.7 1.0 OE1 D:GLU53 4.2 25.8 1.0 OE1 C:GLU101 4.3 39.2 1.0 O C:HOH708 4.3 39.9 1.0 OE1 B:GLN9 4.4 44.3 1.0 O D:HOH642 4.6 32.6 1.0 CD D:GLU53 4.7 25.3 1.0 OE2 C:GLU101 4.7 39.7 1.0 CD C:GLU101 4.9 35.5 1.0

Magnesium binding site 4 out of 4 in the Crystal Structure of BA2930 in Complex with Accoa and Cytosine


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Crystal Structure of BA2930 in Complex with Accoa and Cytosine within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg268 b:35.4 occ:1.00 O A:HOH719 2.0 43.3 1.0 O B:HOH270 2.0 15.1 1.0 O B:HOH336 2.1 27.2 1.0 O B:HOH319 2.1 26.9 1.0 O B:HOH604 2.2 26.0 1.0 O B:THR119 4.2 23.4 1.0 O A:HOH679 4.3 40.6 1.0 O B:ARG118 4.3 21.1 1.0 ND1 B:HIS103 4.3 26.3 1.0 CA B:THR119 4.4 23.1 1.0 O B:TYR120 4.5 22.6 1.0 C B:THR119 4.5 23.0 1.0 O B:HOH345 4.6 25.5 1.0 CB B:HIS103 5.0 21.6 1.0

M.M.Klimecka, M.Chruszcz, P.J.Porebski, M.Cymborowski, W.Anderson, W.Minor. Crystal Structure of BA2930 in Complex with Accoa and Cytosine To Be Published.