Magnesium »
PDB 3tx9-3u8u »
3u5z »
Magnesium in PDB 3u5z: Structure of T4 Bacteriophage Clamp Loader Bound to the T4 Clamp, Primer-Template Dna, and Atp Analog
Protein crystallography data
The structure of Structure of T4 Bacteriophage Clamp Loader Bound to the T4 Clamp, Primer-Template Dna, and Atp Analog, PDB code: 3u5z
was solved by
B.A.Kelch,
D.L.Makino,
M.O'donnell,
J.Kuriyan,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 49.19 / 3.50 |
| Space group | P 21 21 21 |
| Cell size a, b, c (Å), α, β, γ (°) | 95.702, 239.177, 247.672, 90.00, 90.00, 90.00 |
| R / Rfree (%) | 23.1 / 27.9 |
Other elements in 3u5z:
The structure of Structure of T4 Bacteriophage Clamp Loader Bound to the T4 Clamp, Primer-Template Dna, and Atp Analog also contains other interesting chemical elements:
| Fluorine | (F) | 18 atoms |
Magnesium Binding Sites:
The binding sites of Magnesium atom in the Structure of T4 Bacteriophage Clamp Loader Bound to the T4 Clamp, Primer-Template Dna, and Atp Analog
(pdb code 3u5z). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 8 binding sites of Magnesium where determined in the Structure of T4 Bacteriophage Clamp Loader Bound to the T4 Clamp, Primer-Template Dna, and Atp Analog, PDB code: 3u5z:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6; 7; 8;
In total 8 binding sites of Magnesium where determined in the Structure of T4 Bacteriophage Clamp Loader Bound to the T4 Clamp, Primer-Template Dna, and Atp Analog, PDB code: 3u5z:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6; 7; 8;
Magnesium binding site 1 out of 8 in 3u5z
Go back to
Magnesium Binding Sites List in 3u5z
Magnesium binding site 1 out
of 8 in the Structure of T4 Bacteriophage Clamp Loader Bound to the T4 Clamp, Primer-Template Dna, and Atp Analog
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Structure of T4 Bacteriophage Clamp Loader Bound to the T4 Clamp, Primer-Template Dna, and Atp Analog within 5.0Å range:
|
Magnesium binding site 2 out of 8 in 3u5z
Go back to
Magnesium Binding Sites List in 3u5z
Magnesium binding site 2 out
of 8 in the Structure of T4 Bacteriophage Clamp Loader Bound to the T4 Clamp, Primer-Template Dna, and Atp Analog
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Structure of T4 Bacteriophage Clamp Loader Bound to the T4 Clamp, Primer-Template Dna, and Atp Analog within 5.0Å range:
|
Magnesium binding site 3 out of 8 in 3u5z
Go back to
Magnesium Binding Sites List in 3u5z
Magnesium binding site 3 out
of 8 in the Structure of T4 Bacteriophage Clamp Loader Bound to the T4 Clamp, Primer-Template Dna, and Atp Analog
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of Structure of T4 Bacteriophage Clamp Loader Bound to the T4 Clamp, Primer-Template Dna, and Atp Analog within 5.0Å range:
|
Magnesium binding site 4 out of 8 in 3u5z
Go back to
Magnesium Binding Sites List in 3u5z
Magnesium binding site 4 out
of 8 in the Structure of T4 Bacteriophage Clamp Loader Bound to the T4 Clamp, Primer-Template Dna, and Atp Analog
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 4 of Structure of T4 Bacteriophage Clamp Loader Bound to the T4 Clamp, Primer-Template Dna, and Atp Analog within 5.0Å range:
|
Magnesium binding site 5 out of 8 in 3u5z
Go back to
Magnesium Binding Sites List in 3u5z
Magnesium binding site 5 out
of 8 in the Structure of T4 Bacteriophage Clamp Loader Bound to the T4 Clamp, Primer-Template Dna, and Atp Analog
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 5 of Structure of T4 Bacteriophage Clamp Loader Bound to the T4 Clamp, Primer-Template Dna, and Atp Analog within 5.0Å range:
|
Magnesium binding site 6 out of 8 in 3u5z
Go back to
Magnesium Binding Sites List in 3u5z
Magnesium binding site 6 out
of 8 in the Structure of T4 Bacteriophage Clamp Loader Bound to the T4 Clamp, Primer-Template Dna, and Atp Analog
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 6 of Structure of T4 Bacteriophage Clamp Loader Bound to the T4 Clamp, Primer-Template Dna, and Atp Analog within 5.0Å range:
|
Magnesium binding site 7 out of 8 in 3u5z
Go back to
Magnesium Binding Sites List in 3u5z
Magnesium binding site 7 out
of 8 in the Structure of T4 Bacteriophage Clamp Loader Bound to the T4 Clamp, Primer-Template Dna, and Atp Analog
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 7 of Structure of T4 Bacteriophage Clamp Loader Bound to the T4 Clamp, Primer-Template Dna, and Atp Analog within 5.0Å range:
|
Magnesium binding site 8 out of 8 in 3u5z
Go back to
Magnesium Binding Sites List in 3u5z
Magnesium binding site 8 out
of 8 in the Structure of T4 Bacteriophage Clamp Loader Bound to the T4 Clamp, Primer-Template Dna, and Atp Analog
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 8 of Structure of T4 Bacteriophage Clamp Loader Bound to the T4 Clamp, Primer-Template Dna, and Atp Analog within 5.0Å range:
|
Reference:
B.A.Kelch,
D.L.Makino,
M.O'donnell,
J.Kuriyan.
How A Dna Polymerase Clamp Loader Opens A Sliding Clamp. Science V. 334 1675 2011.
ISSN: ISSN 0036-8075
PubMed: 22194570
DOI: 10.1126/SCIENCE.1211884
Page generated: Thu Aug 15 12:21:49 2024
ISSN: ISSN 0036-8075
PubMed: 22194570
DOI: 10.1126/SCIENCE.1211884
Last articles
F in 5CAVF in 5CCZ
F in 5CAU
F in 5CAS
F in 5C4T
F in 5CA9
F in 5CAQ
F in 5C9C
F in 5C9X
F in 5C4S
