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Magnesium in PDB 3wxx: Crystal Structure of A T3SS Complex From Aeromonas Hydrophila

Protein crystallography data

The structure of Crystal Structure of A T3SS Complex From Aeromonas Hydrophila, PDB code: 3wxx was solved by V.S.Nguyen, C.Jobichen, J.Sivaraman, Y.K.M.Henry, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 15.00 / 2.70
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 124.662, 151.942, 106.253, 90.00, 104.95, 90.00
R / Rfree (%) 21.3 / 25.2

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of A T3SS Complex From Aeromonas Hydrophila (pdb code 3wxx). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of A T3SS Complex From Aeromonas Hydrophila, PDB code: 3wxx:

Magnesium binding site 1 out of 1 in 3wxx

Go back to Magnesium Binding Sites List in 3wxx
Magnesium binding site 1 out of 1 in the Crystal Structure of A T3SS Complex From Aeromonas Hydrophila


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of A T3SS Complex From Aeromonas Hydrophila within 5.0Å range:
probe atom residue distance (Å) B Occ
G:Mg201

b:55.4
occ:1.00
O G:LEU17 2.3 46.8 1.0
O G:GLY21 2.3 52.4 1.0
OH G:TYR66 2.3 44.8 1.0
C G:GLY20 3.2 43.1 1.0
CA G:GLY20 3.3 42.6 1.0
CZ G:TYR66 3.3 36.0 1.0
C G:LEU17 3.3 42.3 1.0
CE1 G:HIS65 3.3 40.1 1.0
NE2 G:HIS65 3.3 38.8 1.0
CE2 G:TYR66 3.4 34.8 1.0
C G:GLY21 3.4 42.2 1.0
N G:GLY21 3.4 39.1 1.0
O H:GLY184 3.6 40.9 1.0
N G:GLY20 3.8 46.2 1.0
O G:GLY20 3.8 52.1 1.0
CA G:LEU17 3.8 45.2 1.0
CD1 G:LEU17 3.8 50.3 1.0
CA H:GLY184 3.9 38.3 1.0
CA G:GLY21 4.1 38.3 1.0
C H:GLY184 4.1 39.9 1.0
CG G:LEU17 4.2 48.7 1.0
N G:GLN18 4.5 44.4 1.0
O G:PHE16 4.5 47.7 1.0
N G:THR22 4.6 39.1 1.0
CB G:LEU17 4.6 44.4 1.0
ND1 G:HIS65 4.6 41.3 1.0
CE1 G:TYR66 4.7 35.0 1.0
CD2 G:HIS65 4.7 43.0 1.0
CD2 G:TYR66 4.7 34.2 1.0
CA G:THR22 5.0 42.0 1.0
N G:LEU17 5.0 43.7 1.0

Reference:

V.S.Nguyen, C.Jobichen, K.W.Tan, Y.W.Tan, S.L.Chan, K.Ramesh, Y.Yuan, Y.Hong, J.Seetharaman, K.Y.Leung, J.Sivaraman, Y.K.Mok. Structure of Acrh-Aopb Chaperone-Translocator Complex Reveals A Role For Membrane Hairpins in Type III Secretion System Translocon Assembly Structure V. 23 2022 2015.
ISSN: ISSN 0969-2126
PubMed: 26439768
DOI: 10.1016/J.STR.2015.08.014
Page generated: Thu Aug 15 13:38:49 2024

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