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Magnesium in PDB 4cvh: Crystal Structure of Human Isoprenoid Synthase Domain- Containing Protein

Protein crystallography data

The structure of Crystal Structure of Human Isoprenoid Synthase Domain- Containing Protein, PDB code: 4cvh was solved by J.Kopec, D.S.Froese, T.Krojer, J.Newman, W.Kiyani, S.Goubin, C.Strain-Damerell, M.Vollmar, F.Von Delft, N.Burgess-Brown, C.Arrowsmith, A.Edwards, C.Bountra, D.J.Lefeber, W.W.Yue, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 65.64 / 2.39
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 79.360, 116.800, 111.800, 90.00, 90.00, 90.00
R / Rfree (%) 18.852 / 24.369

Other elements in 4cvh:

The structure of Crystal Structure of Human Isoprenoid Synthase Domain- Containing Protein also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Human Isoprenoid Synthase Domain- Containing Protein (pdb code 4cvh). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Human Isoprenoid Synthase Domain- Containing Protein, PDB code: 4cvh:

Magnesium binding site 1 out of 1 in 4cvh

Go back to Magnesium Binding Sites List in 4cvh
Magnesium binding site 1 out of 1 in the Crystal Structure of Human Isoprenoid Synthase Domain- Containing Protein


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Human Isoprenoid Synthase Domain- Containing Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1452

b:47.4
occ:1.00
O A:GLY237 3.0 38.5 1.0
N A:HIS127 3.0 36.3 1.0
O A:LEU234 3.1 41.2 1.0
O A:HOH2015 3.4 44.7 1.0
N A:ARG126 3.4 39.1 1.0
CB A:THR125 3.5 49.7 1.0
CB A:HIS127 3.6 32.5 1.0
O A:GLU235 3.6 33.8 1.0
CD2 A:HIS127 3.7 37.3 1.0
CG A:HIS127 3.7 31.1 1.0
OG1 A:THR125 3.8 44.3 1.0
CA A:HIS127 3.9 34.1 1.0
CA A:ARG126 3.9 37.3 1.0
C A:ARG126 3.9 38.3 1.0
CB A:ARG126 3.9 39.5 1.0
C A:LEU234 4.1 41.3 1.0
C A:THR125 4.1 44.4 1.0
C A:GLU235 4.1 38.9 1.0
C A:GLY237 4.1 42.1 1.0
CA A:THR125 4.3 49.9 1.0
CG2 A:THR125 4.4 62.6 1.0
N A:GLY237 4.4 43.9 1.0
NE2 A:HIS127 4.7 38.8 1.0
ND1 A:HIS127 4.7 36.3 1.0
CA A:GLU235 4.7 42.3 1.0
N A:PHE236 4.7 37.6 1.0
O A:ASP233 4.7 44.6 1.0
CA A:GLY237 4.8 44.5 1.0
N A:GLU235 4.8 42.7 1.0
C A:PHE236 4.9 43.5 1.0
CA A:LEU234 5.0 36.9 1.0
N A:ARG128 5.0 41.6 1.0
O A:THR125 5.0 34.1 1.0

Reference:

J.Kopec, D.S.Froese, T.Krojer, J.Newman, W.Kiyani, S.Goubin. Human Isoprenoid Synthase Domain-Containing Protein To Be Published.
Page generated: Thu Aug 15 16:53:23 2024

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