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Magnesium in PDB 4cvo: Crystal Structure of the N-Terminal Colied-Coil Domain of Human Dna Excision Repair Protein Ercc-6

Protein crystallography data

The structure of Crystal Structure of the N-Terminal Colied-Coil Domain of Human Dna Excision Repair Protein Ercc-6, PDB code: 4cvo was solved by J.A.Newman, T.Krojer, F.Von Delft, C.H.Arrowsmith, A.Edwards, C.Bountra, O.Gileadi, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 35.696 / 1.85
Space group P 64 2 2
Cell size a, b, c (Å), α, β, γ (°) 37.444, 37.444, 321.268, 90.00, 90.00, 120.00
R / Rfree (%) 23.64 / 25.53

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of the N-Terminal Colied-Coil Domain of Human Dna Excision Repair Protein Ercc-6 (pdb code 4cvo). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of the N-Terminal Colied-Coil Domain of Human Dna Excision Repair Protein Ercc-6, PDB code: 4cvo:

Magnesium binding site 1 out of 1 in 4cvo

Go back to Magnesium Binding Sites List in 4cvo
Magnesium binding site 1 out of 1 in the Crystal Structure of the N-Terminal Colied-Coil Domain of Human Dna Excision Repair Protein Ercc-6


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of the N-Terminal Colied-Coil Domain of Human Dna Excision Repair Protein Ercc-6 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1159

b:44.1
occ:0.50
OD1 A:ASP114 2.0 43.7 1.0
O A:HOH2005 2.3 44.9 1.0
NE2 A:HIS118 2.3 44.1 1.0
CG A:ASP114 3.0 44.4 1.0
CD2 A:HIS118 3.2 43.9 1.0
CE1 A:HIS118 3.2 44.8 1.0
OD2 A:ASP114 3.4 46.0 1.0
ND1 A:HIS118 4.3 45.0 1.0
CG A:HIS118 4.3 44.5 1.0
CB A:ASP114 4.4 43.9 1.0
O A:TYR100 4.5 47.6 1.0
CD1 A:LEU105 4.9 49.9 1.0
CA A:ASP114 5.0 42.9 1.0

Reference:

J.A.Newman, T.Krojer, F.Von Delft, C.H.Arrowsmith, A.Edwards, C.Bountra, O.Gileadi. Crystal Structure of the N-Terminal Colied-Coil Domain of Human Dna Excision Repair Protein Ercc-6 To Be Published.
Page generated: Thu Aug 15 16:53:50 2024

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