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Magnesium in PDB 4eon: Thr 160 Phosphorylated CDK2 H84S, Q85M, Q131E - Human Cyclin A3 Complex with the Inhibitor RO3306

Enzymatic activity of Thr 160 Phosphorylated CDK2 H84S, Q85M, Q131E - Human Cyclin A3 Complex with the Inhibitor RO3306

All present enzymatic activity of Thr 160 Phosphorylated CDK2 H84S, Q85M, Q131E - Human Cyclin A3 Complex with the Inhibitor RO3306:
2.7.11.22;

Protein crystallography data

The structure of Thr 160 Phosphorylated CDK2 H84S, Q85M, Q131E - Human Cyclin A3 Complex with the Inhibitor RO3306, PDB code: 4eon was solved by A.Echalier, E.Cot, A.Camasses, E.Hodimont, F.Hoh, F.Sheinerman, L.Krasinska, D.Fisher, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.86 / 2.40
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 73.626, 132.979, 176.727, 90.00, 90.00, 90.00
R / Rfree (%) 21.9 / 25.4

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Thr 160 Phosphorylated CDK2 H84S, Q85M, Q131E - Human Cyclin A3 Complex with the Inhibitor RO3306 (pdb code 4eon). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Thr 160 Phosphorylated CDK2 H84S, Q85M, Q131E - Human Cyclin A3 Complex with the Inhibitor RO3306, PDB code: 4eon:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 4eon

Go back to Magnesium Binding Sites List in 4eon
Magnesium binding site 1 out of 2 in the Thr 160 Phosphorylated CDK2 H84S, Q85M, Q131E - Human Cyclin A3 Complex with the Inhibitor RO3306


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Thr 160 Phosphorylated CDK2 H84S, Q85M, Q131E - Human Cyclin A3 Complex with the Inhibitor RO3306 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg501

b:38.0
occ:1.00
O B:HOH617 2.5 38.5 1.0
O B:HOH618 2.5 35.9 1.0
O B:GLN203 2.6 50.6 1.0
O B:ILE206 2.7 48.0 1.0
O B:MET200 2.7 51.9 1.0
C B:GLN203 3.7 49.8 1.0
C B:ILE206 3.8 46.6 1.0
C B:MET200 3.9 51.2 1.0
CG2 B:THR207 4.2 48.9 1.0
CB B:GLN203 4.3 46.3 1.0
CA B:GLN203 4.4 48.9 1.0
CG B:MET200 4.4 49.3 1.0
CA B:THR207 4.5 46.9 1.0
N B:GLN203 4.5 50.6 1.0
O B:LYS201 4.6 55.0 1.0
N B:THR207 4.6 46.2 1.0
N B:ILE206 4.6 46.5 1.0
CA B:LYS201 4.6 55.3 1.0
C B:LYS201 4.7 54.8 1.0
N B:LYS201 4.7 53.1 1.0
N B:PRO204 4.8 50.0 1.0
CA B:ILE206 4.8 46.0 1.0
CA B:MET200 4.9 50.0 1.0
C B:PRO204 4.9 49.9 1.0
CB B:THR207 5.0 48.1 1.0
SD B:MET200 5.0 47.1 1.0
O B:PRO204 5.0 51.0 1.0

Magnesium binding site 2 out of 2 in 4eon

Go back to Magnesium Binding Sites List in 4eon
Magnesium binding site 2 out of 2 in the Thr 160 Phosphorylated CDK2 H84S, Q85M, Q131E - Human Cyclin A3 Complex with the Inhibitor RO3306


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Thr 160 Phosphorylated CDK2 H84S, Q85M, Q131E - Human Cyclin A3 Complex with the Inhibitor RO3306 within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Mg501

b:41.9
occ:1.00
O D:GLN203 2.6 56.0 1.0
O D:ILE206 2.7 55.0 1.0
O D:MET200 2.7 54.6 1.0
C D:GLN203 3.7 55.5 1.0
C D:MET200 3.8 54.8 1.0
C D:ILE206 3.9 54.2 1.0
CB D:GLN203 4.2 50.4 1.0
CG D:MET200 4.3 53.4 1.0
CA D:GLN203 4.3 53.6 1.0
N D:GLN203 4.4 55.1 1.0
CA D:THR207 4.6 51.8 1.0
N D:LYS201 4.6 56.7 1.0
CA D:LYS201 4.6 58.7 1.0
O D:PRO204 4.7 58.2 1.0
N D:THR207 4.7 52.3 1.0
CA D:MET200 4.7 53.4 1.0
C D:LYS201 4.7 58.5 1.0
O D:LYS201 4.8 59.1 1.0
N D:ILE206 4.8 56.6 1.0
N D:PRO204 4.8 56.3 1.0
C D:PRO204 4.8 57.3 1.0
SD D:MET200 4.8 53.3 1.0
CG2 D:THR207 4.8 53.0 1.0
CA D:ILE206 4.9 55.4 1.0
CB D:MET200 5.0 53.0 1.0

Reference:

A.Echalier, E.Cot, A.Camasses, E.Hodimont, F.Hoh, P.Jay, F.Sheinerman, L.Krasinska, D.Fisher. An Integrated Chemical Biology Approach Provides Insight Into CDK2 Functional Redundancy and Inhibitor Sensitivity. Chem.Biol. V. 19 1028 2012.
ISSN: ISSN 1074-5521
PubMed: 22921070
DOI: 10.1016/J.CHEMBIOL.2012.06.015
Page generated: Fri Aug 16 14:34:33 2024

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