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Magnesium in PDB 4fhx: Crystal Structures of the CID1 Poly (U) Polymerase Reveal the Mechanism For Utp Selectivity - H336N Mutant Bound to Mgatp

Protein crystallography data

The structure of Crystal Structures of the CID1 Poly (U) Polymerase Reveal the Mechanism For Utp Selectivity - H336N Mutant Bound to Mgatp, PDB code: 4fhx was solved by B.M.Lunde, I.Magler, A.Meinhart, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 41.67 / 2.70
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 53.720, 62.470, 111.826, 90.00, 90.00, 90.00
R / Rfree (%) 20.4 / 28

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structures of the CID1 Poly (U) Polymerase Reveal the Mechanism For Utp Selectivity - H336N Mutant Bound to Mgatp (pdb code 4fhx). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structures of the CID1 Poly (U) Polymerase Reveal the Mechanism For Utp Selectivity - H336N Mutant Bound to Mgatp, PDB code: 4fhx:

Magnesium binding site 1 out of 1 in 4fhx

Go back to Magnesium Binding Sites List in 4fhx
Magnesium binding site 1 out of 1 in the Crystal Structures of the CID1 Poly (U) Polymerase Reveal the Mechanism For Utp Selectivity - H336N Mutant Bound to Mgatp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structures of the CID1 Poly (U) Polymerase Reveal the Mechanism For Utp Selectivity - H336N Mutant Bound to Mgatp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg402

b:71.9
occ:1.00
O2A A:ATP401 2.1 80.9 1.0
O2B A:ATP401 2.2 80.4 1.0
O3G A:ATP401 2.2 78.3 1.0
O A:HOH539 2.2 81.3 1.0
OD2 A:ASP103 2.3 66.9 1.0
OD1 A:ASP101 2.3 68.8 1.0
CG A:ASP101 3.3 62.0 1.0
CG A:ASP103 3.3 58.2 1.0
PB A:ATP401 3.5 84.1 1.0
PA A:ATP401 3.5 84.4 1.0
PG A:ATP401 3.5 81.6 1.0
OD2 A:ASP101 3.6 64.3 1.0
OD1 A:ASP103 3.7 60.8 1.0
O3A A:ATP401 3.9 83.6 1.0
O3B A:ATP401 3.9 82.5 1.0
O1G A:ATP401 3.9 80.6 1.0
O5' A:ATP401 4.1 85.0 1.0
C5' A:ATP401 4.1 86.4 1.0
O A:ASP101 4.4 55.5 1.0
OG A:SER90 4.6 39.7 1.0
CB A:ASP103 4.6 54.8 1.0
CB A:ASP101 4.7 58.4 1.0
O1A A:ATP401 4.8 82.7 1.0
O2G A:ATP401 4.8 81.2 1.0
O1B A:ATP401 4.8 83.0 1.0
O A:HOH507 4.8 38.8 1.0
C A:ASP101 4.9 55.7 1.0

Reference:

B.M.Lunde, I.Magler, A.Meinhart. Crystal Structures of the CID1 Poly (U) Polymerase Reveal the Mechanism For Utp Selectivity. Nucleic Acids Res. V. 40 9815 2012.
ISSN: ISSN 0305-1048
PubMed: 22885303
DOI: 10.1093/NAR/GKS740
Page generated: Mon Aug 11 12:50:24 2025

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