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Magnesium in PDB 4g3p: Crystal Structure of Glmu From Mycobacterium Tuberculosis Snapshot 3

Enzymatic activity of Crystal Structure of Glmu From Mycobacterium Tuberculosis Snapshot 3

All present enzymatic activity of Crystal Structure of Glmu From Mycobacterium Tuberculosis Snapshot 3:
2.3.1.157; 2.7.7.23;

Protein crystallography data

The structure of Crystal Structure of Glmu From Mycobacterium Tuberculosis Snapshot 3, PDB code: 4g3p was solved by P.A.Jagtap, S.K.Verma, B.Prakash, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.86 / 2.47
Space group H 3
Cell size a, b, c (Å), α, β, γ (°) 77.470, 77.470, 277.500, 90.00, 90.00, 120.00
R / Rfree (%) 18.1 / 24.1

Other elements in 4g3p:

The structure of Crystal Structure of Glmu From Mycobacterium Tuberculosis Snapshot 3 also contains other interesting chemical elements:

Cobalt (Co) 2 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Glmu From Mycobacterium Tuberculosis Snapshot 3 (pdb code 4g3p). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of Glmu From Mycobacterium Tuberculosis Snapshot 3, PDB code: 4g3p:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 4g3p

Go back to Magnesium Binding Sites List in 4g3p
Magnesium binding site 1 out of 2 in the Crystal Structure of Glmu From Mycobacterium Tuberculosis Snapshot 3


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Glmu From Mycobacterium Tuberculosis Snapshot 3 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg502

b:4.3
occ:0.33
OD1 A:ASP417 1.9 26.5 1.0
O A:HOH759 2.2 18.6 1.0
CG A:ASP417 3.0 21.5 1.0
OD2 A:ASP417 3.4 18.7 1.0
CO A:CO505 3.7 36.0 0.3
OG A:SER392 4.1 14.8 1.0
CB A:ASP417 4.2 17.2 1.0
O A:SER392 4.4 14.1 1.0
CE A:MET419 4.6 13.5 1.0
CA A:ASP417 4.8 17.9 1.0
CB A:SER392 4.8 12.8 1.0

Magnesium binding site 2 out of 2 in 4g3p

Go back to Magnesium Binding Sites List in 4g3p
Magnesium binding site 2 out of 2 in the Crystal Structure of Glmu From Mycobacterium Tuberculosis Snapshot 3


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of Glmu From Mycobacterium Tuberculosis Snapshot 3 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg504

b:38.8
occ:1.00
O A:HOH756 1.8 27.6 1.0
O4 A:POP501 1.9 36.4 1.0
O1 A:POP501 1.9 29.2 1.0
O A:HOH798 2.1 35.4 1.0
O A:HOH755 2.2 28.4 1.0
P2 A:POP501 3.2 39.6 1.0
P1 A:POP501 3.3 30.9 1.0
O A:POP501 3.6 34.4 1.0
NE2 A:GLN205 3.7 36.4 1.0
O5 A:POP501 3.7 35.9 1.0
O A:HOH791 3.9 5.7 0.6
NH2 A:ARG19 4.0 24.6 1.0
O1A A:UD1506 4.0 17.3 1.0
OE2 A:GLU207 4.2 28.1 1.0
O3 A:POP501 4.2 31.4 1.0
O2 A:POP501 4.2 33.5 1.0
O6 A:POP501 4.3 35.5 1.0
CZ A:ARG19 4.5 25.9 1.0
O A:HOH757 4.6 20.3 1.0
O A:HOH743 4.7 25.2 1.0
NE A:ARG19 4.8 24.9 1.0
CD A:GLN205 4.9 32.3 1.0

Reference:

P.A.Jagtap, S.K.Verma, B.Prakash. Structural Snapshots of Glmu From Mycobacterium Tuberculosis To Be Published.
Page generated: Fri Aug 16 15:22:19 2024

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