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Magnesium in PDB 4gn0: De Novo Phasing of A Hamp-Complex Using An Improved Arcimboldo Method

Protein crystallography data

The structure of De Novo Phasing of A Hamp-Complex Using An Improved Arcimboldo Method, PDB code: 4gn0 was solved by M.Hulko, A.Ursinus, K.Bar, J.Martin, K.Zeth, A.N.Lupas, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 41.93 / 1.75
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 44.115, 48.077, 95.262, 90.00, 98.02, 90.00
R / Rfree (%) 19.3 / 22.4

Magnesium Binding Sites:

The binding sites of Magnesium atom in the De Novo Phasing of A Hamp-Complex Using An Improved Arcimboldo Method (pdb code 4gn0). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the De Novo Phasing of A Hamp-Complex Using An Improved Arcimboldo Method, PDB code: 4gn0:

Magnesium binding site 1 out of 1 in 4gn0

Go back to Magnesium Binding Sites List in 4gn0
Magnesium binding site 1 out of 1 in the De Novo Phasing of A Hamp-Complex Using An Improved Arcimboldo Method


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of De Novo Phasing of A Hamp-Complex Using An Improved Arcimboldo Method within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg401

b:25.8
occ:1.00
OE2 C:GLU304 2.7 23.7 1.0
O C:HOH502 2.9 18.5 1.0
CD C:GLU304 3.7 41.2 1.0
OE1 C:GLU304 4.0 38.8 1.0
CB C:LEU307 4.6 17.4 1.0
CD1 C:LEU307 4.7 22.1 1.0
O C:GLU304 4.9 21.2 1.0

Reference:

M.Sammito, C.Millan, D.D.Rodriguez, I.M.De Ilarduya, K.Meindl, I.De Marino, G.Petrillo, R.M.Buey, J.M.De Pereda, K.Zeth, G.M.Sheldrick, I.Uson. Exploiting Tertiary Structure Through Local Folds For Crystallographic Phasing. Nat.Methods V. 10 1099 2013.
ISSN: ISSN 1548-7091
PubMed: 24037245
DOI: 10.1038/NMETH.2644
Page generated: Fri Aug 16 15:34:56 2024

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