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Magnesium in PDB 4i1l: Structural and Biological Features of FOXP3 Dimerization Relevant to Regulatory T Cell Function

Protein crystallography data

The structure of Structural and Biological Features of FOXP3 Dimerization Relevant to Regulatory T Cell Function, PDB code: 4i1l was solved by X.M.Song, M.I.Greene, Z.C.Zhou, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 35.81 / 2.10
Space group P 43 2 2
Cell size a, b, c (Å), α, β, γ (°) 37.130, 37.130, 135.672, 90.00, 90.00, 90.00
R / Rfree (%) 23.6 / 28.9

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structural and Biological Features of FOXP3 Dimerization Relevant to Regulatory T Cell Function (pdb code 4i1l). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 3 binding sites of Magnesium where determined in the Structural and Biological Features of FOXP3 Dimerization Relevant to Regulatory T Cell Function, PDB code: 4i1l:
Jump to Magnesium binding site number: 1; 2; 3;

Magnesium binding site 1 out of 3 in 4i1l

Go back to Magnesium Binding Sites List in 4i1l
Magnesium binding site 1 out of 3 in the Structural and Biological Features of FOXP3 Dimerization Relevant to Regulatory T Cell Function


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structural and Biological Features of FOXP3 Dimerization Relevant to Regulatory T Cell Function within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg304

b:80.6
occ:1.00
O3 A:SO4301 2.2 91.0 1.0
O3 A:SO4302 2.9 97.5 1.0
O1 A:SO4302 3.2 98.8 1.0
S A:SO4301 3.6 96.9 1.0
S A:SO4302 3.6 99.2 1.0
O2 A:SO4301 4.0 94.1 1.0
O4 A:SO4301 4.3 92.0 1.0
O2 A:SO4302 4.4 97.2 1.0
O1 A:SO4301 4.7 92.9 1.0
O4 A:SO4302 4.8 95.5 1.0

Magnesium binding site 2 out of 3 in 4i1l

Go back to Magnesium Binding Sites List in 4i1l
Magnesium binding site 2 out of 3 in the Structural and Biological Features of FOXP3 Dimerization Relevant to Regulatory T Cell Function


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structural and Biological Features of FOXP3 Dimerization Relevant to Regulatory T Cell Function within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg305

b:68.0
occ:1.00
O1 A:SO4303 2.3 61.8 1.0
OXT A:ACT308 2.5 69.2 1.0
O3 A:SO4303 2.8 53.8 1.0
O A:ACT308 2.9 68.9 1.0
C A:ACT308 2.9 69.5 1.0
S A:SO4303 2.9 70.7 1.0
O A:HOH412 3.1 47.2 1.0
O4 A:SO4303 3.3 58.6 1.0
O A:HOH411 3.9 87.9 1.0
CH3 A:ACT308 4.1 67.1 1.0
O2 A:SO4303 4.4 63.1 1.0

Magnesium binding site 3 out of 3 in 4i1l

Go back to Magnesium Binding Sites List in 4i1l
Magnesium binding site 3 out of 3 in the Structural and Biological Features of FOXP3 Dimerization Relevant to Regulatory T Cell Function


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Structural and Biological Features of FOXP3 Dimerization Relevant to Regulatory T Cell Function within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg306

b:60.9
occ:0.50
CD1 A:LEU234 4.0 40.8 1.0
O A:HOH416 4.6 76.9 0.5
CG A:GLN231 4.9 46.6 1.0

Reference:

X.Song, B.Li, Y.Xiao, C.Chen, Q.Wang, Y.Liu, A.Berezov, C.Xu, Y.Gao, Z.Li, S.L.Wu, Z.Cai, H.Zhang, B.L.Karger, W.W.Hancock, A.D.Wells, Z.Zhou, M.I.Greene. Structural and Biological Features of FOXP3 Dimerization Relevant to Regulatory T Cell Function. Cell Rep V. 1 665 2012.
ISSN: ESSN 2211-1247
PubMed: 22813742
DOI: 10.1016/J.CELREP.2012.04.012
Page generated: Fri Aug 16 16:31:03 2024

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