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Magnesium in PDB 4lwd: Human CARMA1 Card Domain

Protein crystallography data

The structure of Human CARMA1 Card Domain, PDB code: 4lwd was solved by C.Zheng, H.Wu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 25.95 / 1.79
Space group P 41 3 2
Cell size a, b, c (Å), α, β, γ (°) 82.045, 82.045, 82.045, 90.00, 90.00, 90.00
R / Rfree (%) 19.9 / 22.3

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Human CARMA1 Card Domain (pdb code 4lwd). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Human CARMA1 Card Domain, PDB code: 4lwd:

Magnesium binding site 1 out of 1 in 4lwd

Go back to Magnesium Binding Sites List in 4lwd
Magnesium binding site 1 out of 1 in the Human CARMA1 Card Domain


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Human CARMA1 Card Domain within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg203

b:29.8
occ:1.00
OD2 A:ASP58 2.1 22.7 1.0
O A:HOH310 2.2 27.1 0.5
O A:HOH328 2.5 34.0 1.0
CG A:ASP58 3.0 26.2 1.0
OD1 A:ASP58 3.3 23.3 1.0
OE2 A:GLU54 4.2 37.8 1.0
CB A:ASP58 4.4 19.5 1.0
O A:GLU54 4.6 24.8 1.0
O A:HOH311 4.7 27.3 1.0
OE1 A:GLN55 4.7 71.9 1.0
CD A:GLU54 4.7 48.8 1.0
CB A:GLU54 4.9 25.6 1.0
CG A:GLU54 4.9 47.2 1.0
C A:GLU54 4.9 28.0 1.0

Reference:

Q.Qiao, C.Yang, C.Zheng, L.Fontan, L.David, X.Yu, C.Bracken, M.Rosen, A.Melnick, E.H.Egelman, H.Wu. Structural Architecture of the CARMA1/BCL10/MALT1 Signalosome: Nucleation-Induced Filamentous Assembly. Mol.Cell V. 51 766 2013.
ISSN: ISSN 1097-2765
PubMed: 24074955
DOI: 10.1016/J.MOLCEL.2013.08.032
Page generated: Mon Aug 11 20:10:14 2025

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