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Magnesium in PDB 4lya: Essc (Atpases 2 and 3) From Geobacillus Thermodenitrificans (Semet)

Protein crystallography data

The structure of Essc (Atpases 2 and 3) From Geobacillus Thermodenitrificans (Semet), PDB code: 4lya was solved by D.L.Dovala, A.Bendebury, J.S.Cox, R.M.Stroud, O.S.Rosenberg, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 49.93 / 2.45
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 52.346, 62.971, 83.888, 90.00, 107.47, 90.00
R / Rfree (%) 20.8 / 26.3

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Essc (Atpases 2 and 3) From Geobacillus Thermodenitrificans (Semet) (pdb code 4lya). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Essc (Atpases 2 and 3) From Geobacillus Thermodenitrificans (Semet), PDB code: 4lya:

Magnesium binding site 1 out of 1 in 4lya

Go back to Magnesium Binding Sites List in 4lya
Magnesium binding site 1 out of 1 in the Essc (Atpases 2 and 3) From Geobacillus Thermodenitrificans (Semet)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Essc (Atpases 2 and 3) From Geobacillus Thermodenitrificans (Semet) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1501

b:36.3
occ:1.00
OG1 A:THR1291 2.4 17.5 1.0
O1G A:ATP1503 2.6 38.8 1.0
O A:HOH1658 2.8 26.0 1.0
O1B A:ATP1503 2.8 37.7 1.0
OD2 A:ASP1377 3.3 33.7 1.0
PG A:ATP1503 3.8 22.1 1.0
CB A:THR1291 3.8 17.7 1.0
O2G A:ATP1503 3.8 35.4 1.0
PB A:ATP1503 4.0 19.6 1.0
CG A:ASP1377 4.1 34.3 1.0
OD1 A:ASP1377 4.2 30.8 1.0
N A:THR1291 4.3 14.7 1.0
CA A:THR1291 4.4 14.3 1.0
O3B A:ATP1503 4.4 38.0 1.0
O A:ASP1377 4.6 19.6 1.0
O2B A:ATP1503 4.7 16.5 1.0
CG2 A:THR1291 4.7 13.5 1.0
CE A:LYS1290 4.7 17.7 1.0
OD2 A:ASP1316 4.8 58.3 1.0
CB A:LYS1290 4.8 12.2 1.0
NZ A:LYS1290 4.9 12.5 1.0

Reference:

D.L.Dovala, A.Bendebury, J.S.Cox, R.M.Stroud, O.S.Rosenberg. Geobacillus Protein To Be Published.
Page generated: Mon Aug 11 20:11:28 2025

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