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Magnesium in PDB 4ots: Crystal Structure of Isolated Operophtera Brumata CPV18

Protein crystallography data

The structure of Crystal Structure of Isolated Operophtera Brumata CPV18, PDB code: 4ots was solved by D.I.Stuart, G.C.Sutton, D.Axford, X.Ji, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 27.47 / 1.70
Space group I 2 3
Cell size a, b, c (Å), α, β, γ (°) 102.794, 102.794, 102.794, 90.00, 90.00, 90.00
R / Rfree (%) 10 / 13.2

Other elements in 4ots:

The structure of Crystal Structure of Isolated Operophtera Brumata CPV18 also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Isolated Operophtera Brumata CPV18 (pdb code 4ots). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Isolated Operophtera Brumata CPV18, PDB code: 4ots:

Magnesium binding site 1 out of 1 in 4ots

Go back to Magnesium Binding Sites List in 4ots
Magnesium binding site 1 out of 1 in the Crystal Structure of Isolated Operophtera Brumata CPV18


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Isolated Operophtera Brumata CPV18 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg304

b:33.7
occ:1.00
O2G A:GTP302 2.0 27.1 0.8
O2B A:GTP302 2.1 32.3 0.8
O A:HOH511 2.2 25.6 1.0
O A:HOH527 2.5 17.1 1.0
O2A A:GTP302 2.6 35.5 0.8
PB A:GTP302 3.3 28.9 0.8
PG A:GTP302 3.3 27.8 0.8
HH12 A:ARG18 3.3 18.0 1.0
O3B A:GTP302 3.7 51.8 0.8
HG2 A:ARG247 3.7 17.4 1.0
PA A:GTP302 3.8 31.0 0.8
HA A:ARG247 3.9 5.3 1.0
O3A A:GTP302 3.9 41.1 0.8
O1G A:GTP302 4.0 29.1 0.8
NH1 A:ARG18 4.1 15.0 1.0
HH11 A:ARG18 4.2 18.0 1.0
O A:HOH547 4.3 30.2 1.0
O A:HOH546 4.3 21.6 1.0
H A:GLN248 4.4 6.4 1.0
O3G A:GTP302 4.4 21.3 0.8
O1A A:GTP302 4.5 21.2 0.8
O1B A:GTP302 4.5 25.7 0.8
O A:GLY246 4.5 6.2 1.0
CG A:ARG247 4.5 14.5 1.0
HG3 A:ARG247 4.7 17.4 1.0
CA A:ARG247 4.8 4.4 1.0
HB3 A:ARG247 4.9 12.6 1.0

Reference:

D.Axford, X.Ji, D.I.Stuart, G.Sutton. In Cellulo Structure Determination of A Novel Cypovirus Polyhedrin. Acta Crystallogr.,Sect.D V. 70 1435 2014.
ISSN: ISSN 0907-4449
PubMed: 24816111
DOI: 10.1107/S1399004714004714
Page generated: Tue Aug 20 00:59:39 2024

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