Atomistry » Magnesium » PDB 4pjk-4pyk » 4pjk
Atomistry »
  Magnesium »
    PDB 4pjk-4pyk »
      4pjk »

Magnesium in PDB 4pjk: Dicty Myosin II R238E.E459R Mutant (with Adp.Pi) in the Pi Release State

Enzymatic activity of Dicty Myosin II R238E.E459R Mutant (with Adp.Pi) in the Pi Release State

All present enzymatic activity of Dicty Myosin II R238E.E459R Mutant (with Adp.Pi) in the Pi Release State:
3.6.4.1;

Protein crystallography data

The structure of Dicty Myosin II R238E.E459R Mutant (with Adp.Pi) in the Pi Release State, PDB code: 4pjk was solved by T.Isabet, H.Benisty, P.Llinas, H.L.Sweeney, A.Houdusse, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.55 / 2.15
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 87.100, 150.150, 154.040, 90.00, 90.00, 90.00
R / Rfree (%) 17.6 / 21.3

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Dicty Myosin II R238E.E459R Mutant (with Adp.Pi) in the Pi Release State (pdb code 4pjk). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Dicty Myosin II R238E.E459R Mutant (with Adp.Pi) in the Pi Release State, PDB code: 4pjk:

Magnesium binding site 1 out of 1 in 4pjk

Go back to Magnesium Binding Sites List in 4pjk
Magnesium binding site 1 out of 1 in the Dicty Myosin II R238E.E459R Mutant (with Adp.Pi) in the Pi Release State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Dicty Myosin II R238E.E459R Mutant (with Adp.Pi) in the Pi Release State within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg801

b:37.0
occ:1.00
O A:HOH959 2.0 34.4 1.0
O A:HOH958 2.0 33.2 1.0
OG1 A:THR186 2.0 39.8 1.0
O2B A:ADP802 2.0 35.1 1.0
OG A:SER237 2.1 39.2 1.0
O A:HOH957 2.1 32.6 1.0
CB A:THR186 3.0 38.0 1.0
CB A:SER237 3.2 35.9 1.0
PB A:ADP802 3.3 37.6 1.0
O3B A:ADP802 3.5 36.0 1.0
N A:SER237 3.8 37.0 1.0
N A:THR186 3.9 32.3 1.0
O2A A:ADP802 4.0 37.8 1.0
CA A:THR186 4.0 33.2 1.0
CG2 A:THR186 4.0 37.0 1.0
CA A:SER237 4.1 36.5 1.0
O1 A:PO4803 4.1 39.5 0.6
O3A A:ADP802 4.2 33.4 1.0
OD2 A:ASP454 4.3 47.2 1.0
OD1 A:ASP454 4.3 46.9 1.0
O4 A:PO4803 4.4 40.7 0.6
O1B A:ADP802 4.5 37.2 1.0
O A:HOH964 4.5 46.8 1.0
PA A:ADP802 4.5 36.1 1.0
O1A A:ADP802 4.6 37.6 1.0
O A:ASN235 4.6 37.0 1.0
CG A:ASP454 4.7 47.2 1.0
ND2 A:ASN233 4.7 31.0 1.0
CB A:LYS185 4.9 31.3 1.0
C A:SER236 4.9 38.7 1.0
P A:PO4803 4.9 22.7 0.6
C A:LYS185 4.9 36.7 1.0
CE A:LYS185 5.0 41.0 1.0

Reference:

P.Llinas, T.Isabet, L.Song, V.Ropars, B.Zong, H.Benisty, S.Sirigu, C.Morris, C.Kikuti, D.Safer, H.L.Sweeney, A.Houdusse. How Actin Initiates the Motor Activity of Myosin Dev.Cell V. 33 1 2015.
ISSN: ISSN 1534-5807
DOI: 10.1016/J.BPJ.2014.11.160
Page generated: Tue Aug 20 01:32:23 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy