Magnesium in PDB 4qgp: Crystal Structure of A Pyrophosphatase (AF1178) From Archaeoglobus Fulgidus Dsm 4304 at 1.80 A Resolution

The structure of Crystal Structure of A Pyrophosphatase (AF1178) From Archaeoglobus Fulgidus Dsm 4304 at 1.80 A Resolution, PDB code: 4qgp was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	28.20 / 1.78
Space group	I 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	49.168, 102.136, 103.285, 90.00, 90.00, 90.00
R / Rfree (%)	19.4 / 23.8

The structure of Crystal Structure of A Pyrophosphatase (AF1178) From Archaeoglobus Fulgidus Dsm 4304 at 1.80 A Resolution also contains other interesting chemical elements:

Chlorine	(Cl)	1 atom
Sodium	(Na)	2 atoms

The binding sites of Magnesium atom in the Crystal Structure of A Pyrophosphatase (AF1178) From Archaeoglobus Fulgidus Dsm 4304 at 1.80 A Resolution (pdb code 4qgp). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of A Pyrophosphatase (AF1178) From Archaeoglobus Fulgidus Dsm 4304 at 1.80 A Resolution, PDB code: 4qgp:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Crystal Structure of A Pyrophosphatase (AF1178) From Archaeoglobus Fulgidus Dsm 4304 at 1.80 A Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of A Pyrophosphatase (AF1178) From Archaeoglobus Fulgidus Dsm 4304 at 1.80 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg201 b:18.4 occ:1.00 OE1 A:GLU36 2.0 19.5 1.0 OE1 A:GLU33 2.0 18.4 1.0 OD2 A:ASP67 2.0 14.4 1.0 OE1 A:GLU64 2.1 20.0 1.0 O A:HOH302 2.2 19.4 1.0 O A:HOH305 2.4 21.1 1.0 CD A:GLU33 3.0 16.9 1.0 CD A:GLU64 3.1 20.8 1.0 CG A:ASP67 3.1 18.0 1.0 CD A:GLU36 3.2 24.7 1.0 OE2 A:GLU33 3.2 18.0 1.0 OE2 A:GLU64 3.4 23.5 1.0 CB A:ASP67 3.6 15.0 1.0 O A:HOH322 3.8 47.3 1.0 OE2 A:GLU36 4.0 33.3 1.0 CG A:GLU36 4.1 21.6 1.0 O A:HOH317 4.1 26.8 1.0 CB A:GLU36 4.2 22.0 1.0 OD1 A:ASP67 4.2 18.3 1.0 CG A:GLU33 4.3 17.1 1.0 CG A:GLU64 4.5 21.2 1.0 NZ B:LYS90 4.5 24.0 1.0 CB A:GLU33 4.7 14.7 1.0 CA A:GLU64 4.7 19.2 1.0 CG A:GLU63 4.8 28.2 1.0 OE2 A:GLU63 4.9 34.9 1.0 O A:GLU63 4.9 17.6 1.0 CB A:GLU64 4.9 21.2 1.0 CA A:GLU33 4.9 17.8 1.0

Magnesium binding site 2 out of 2 in the Crystal Structure of A Pyrophosphatase (AF1178) From Archaeoglobus Fulgidus Dsm 4304 at 1.80 A Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of A Pyrophosphatase (AF1178) From Archaeoglobus Fulgidus Dsm 4304 at 1.80 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg201 b:17.6 occ:1.00 O B:HOH304 1.9 17.6 1.0 OE1 B:GLU36 2.0 16.6 1.0 OD2 B:ASP67 2.0 21.2 1.0 OE1 B:GLU33 2.0 16.7 1.0 O B:HOH302 2.2 19.5 1.0 OE1 B:GLU64 2.2 20.2 1.0 CD B:GLU33 3.0 15.1 1.0 CG B:ASP67 3.1 19.1 1.0 CD B:GLU64 3.2 19.2 1.0 OE2 B:GLU33 3.2 22.4 1.0 CD B:GLU36 3.3 20.9 1.0 OE2 B:GLU64 3.4 21.5 1.0 CB B:ASP67 3.7 17.1 1.0 OE2 B:GLU36 4.0 30.4 1.0 OD1 B:ASP67 4.1 18.9 1.0 CB B:GLU36 4.2 19.5 1.0 CG B:GLU36 4.3 23.7 1.0 CG B:GLU33 4.4 14.6 1.0 NZ A:LYS90 4.5 28.1 1.0 CG B:GLU64 4.6 19.6 1.0 CB B:GLU33 4.7 14.8 1.0 O B:HOH353 4.7 35.4 1.0 CA B:GLU64 4.8 20.6 1.0 CA B:GLU33 5.0 17.8 1.0 O B:GLU63 5.0 19.4 1.0 CG B:GLU63 5.0 20.3 1.0

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.