Magnesium in PDB 4s1k: Structure of Uranotaenia Sapphirina Cypovirus (CPV17) Polyhedrin at 100 K

The structure of Structure of Uranotaenia Sapphirina Cypovirus (CPV17) Polyhedrin at 100 K, PDB code: 4s1k was solved by H.M.Ginn, M.Messerschmidt, X.Ji, H.Zhang, D.Axford, R.J.Gildea, G.Winter, A.S.Brewster, J.Hattne, A.Wagner, J.M.Grimes, G.Evans, N.K.Sauter, G.Sutton, D.I.Stuart, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	74.00 / 2.20
Space group	I 2 3
Cell size a, b, c (Å), α, β, γ (°)	104.879, 104.879, 104.879, 90.00, 90.00, 90.00
R / Rfree (%)	14.8 / 19.9

The binding sites of Magnesium atom in the Structure of Uranotaenia Sapphirina Cypovirus (CPV17) Polyhedrin at 100 K (pdb code 4s1k). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of Uranotaenia Sapphirina Cypovirus (CPV17) Polyhedrin at 100 K, PDB code: 4s1k:

Magnesium binding site 1 out of 1 in the Structure of Uranotaenia Sapphirina Cypovirus (CPV17) Polyhedrin at 100 K


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of Uranotaenia Sapphirina Cypovirus (CPV17) Polyhedrin at 100 K within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg302 b:57.2 occ:1.00 O2G A:ATP301 2.2 45.6 1.0 O A:HOH533 2.5 39.4 1.0 O2A A:ATP301 2.6 52.8 1.0 O2B A:ATP301 2.6 49.3 1.0 O A:HOH527 2.6 50.5 1.0 O A:HOH471 2.8 38.6 1.0 PG A:ATP301 3.4 41.1 1.0 PB A:ATP301 3.7 46.0 1.0 O3G A:ATP301 3.8 34.8 1.0 PA A:ATP301 3.8 57.1 1.0 O3B A:ATP301 4.0 43.6 1.0 O3A A:ATP301 4.0 50.0 1.0 C5' A:ATP301 4.5 54.2 1.0 O5' A:ATP301 4.6 55.8 1.0 O1G A:ATP301 4.7 37.1 1.0 CG A:ARG158 4.9 43.0 1.0

H.M.Ginn, M.Messerschmidt, X.Ji, H.Zhang, D.Axford, R.J.Gildea, G.Winter, A.S.Brewster, J.Hattne, A.Wagner, J.M.Grimes, G.Evans, N.K.Sauter, G.Sutton, D.I.Stuart. Structure of CPV17 Polyhedrin Determined By the Improved Analysis of Serial Femtosecond Crystallographic Data. Nat Commun V. 6 6435 2015.
ISSN: ESSN 2041-1723
PubMed: 25751308
DOI: 10.1038/NCOMMS7435