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Magnesium in PDB 4wjm: Crystal Structure of Fructokinase From Brucella Abortus 2308 with Bound Amppnp

Enzymatic activity of Crystal Structure of Fructokinase From Brucella Abortus 2308 with Bound Amppnp

All present enzymatic activity of Crystal Structure of Fructokinase From Brucella Abortus 2308 with Bound Amppnp:
2.7.1.4;

Protein crystallography data

The structure of Crystal Structure of Fructokinase From Brucella Abortus 2308 with Bound Amppnp, PDB code: 4wjm was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 34.75 / 1.70
Space group P 42 21 2
Cell size a, b, c (Å), α, β, γ (°) 109.890, 109.890, 58.100, 90.00, 90.00, 90.00
R / Rfree (%) 17 / 19.5

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Fructokinase From Brucella Abortus 2308 with Bound Amppnp (pdb code 4wjm). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Fructokinase From Brucella Abortus 2308 with Bound Amppnp, PDB code: 4wjm:

Magnesium binding site 1 out of 1 in 4wjm

Go back to Magnesium Binding Sites List in 4wjm
Magnesium binding site 1 out of 1 in the Crystal Structure of Fructokinase From Brucella Abortus 2308 with Bound Amppnp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Fructokinase From Brucella Abortus 2308 with Bound Amppnp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg402

b:29.0
occ:1.00
O1A A:ANP401 1.9 18.1 1.0
O1B A:ANP401 2.2 22.4 1.0
O A:HOH711 2.3 32.5 1.0
O A:HOH797 2.3 50.5 1.0
PA A:ANP401 3.1 16.8 1.0
PB A:ANP401 3.3 20.9 1.0
O3A A:ANP401 3.6 17.7 1.0
O2A A:ANP401 3.8 21.8 1.0
N3B A:ANP401 4.0 20.4 1.0
O A:HOH616 4.1 17.0 1.0
OE1 A:GLU188 4.1 36.9 1.0
O A:HOH665 4.2 27.0 1.0
O A:HOH839 4.2 53.0 1.0
O5' A:ANP401 4.4 15.8 1.0
OE2 A:GLU188 4.5 46.6 1.0
CD A:GLU188 4.6 42.6 1.0
O A:HOH729 4.6 38.4 1.0
O2B A:ANP401 4.6 21.3 1.0
CA A:GLY219 4.9 17.8 1.0

Reference:

P.S.Horanyi, D.M.Dranow, E.Fischer, J.Abendroth, D.D.Lorimer, T.Edwards. Crystal Structure of Fructokinase From Brucella Abortus 2308 with Bound Amppnp To Be Published.
Page generated: Tue Aug 20 13:52:18 2024

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