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Magnesium in PDB 4wkj: Crystallographic Structure of A Dodecameric Rna-Dna Hybrid

Protein crystallography data

The structure of Crystallographic Structure of A Dodecameric Rna-Dna Hybrid, PDB code: 4wkj was solved by R.R.Davis, N.M.Shaban, F.W.Perrino, T.Hollis, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 26.27 / 2.80
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 46.649, 44.459, 83.346, 90.00, 105.27, 90.00
R / Rfree (%) 23.8 / 24.2

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystallographic Structure of A Dodecameric Rna-Dna Hybrid (pdb code 4wkj). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystallographic Structure of A Dodecameric Rna-Dna Hybrid, PDB code: 4wkj:

Magnesium binding site 1 out of 1 in 4wkj

Go back to Magnesium Binding Sites List in 4wkj
Magnesium binding site 1 out of 1 in the Crystallographic Structure of A Dodecameric Rna-Dna Hybrid


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystallographic Structure of A Dodecameric Rna-Dna Hybrid within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Mg101

b:44.3
occ:1.00
O6 F:DG8 4.4 47.1 1.0
O6 F:DG7 4.5 46.3 1.0
N7 F:DG7 4.6 46.9 1.0
N7 F:DG8 4.8 46.7 1.0

Reference:

R.R.Davis, N.M.Shaban, F.W.Perrino, T.Hollis. Crystal Structure of Rna-Dna Duplex Provides Insight Into Conformational Changes Induced By Rnase H Binding To Be Published.
Page generated: Tue Aug 20 13:52:47 2024

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