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Magnesium in PDB 4xe8: Bacillus Thuringiensis Parm with Adp

Protein crystallography data

The structure of Bacillus Thuringiensis Parm with Adp, PDB code: 4xe8 was solved by S.M.Jiang, R.C.Robinson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.93 / 2.38
Space group P 2 21 21
Cell size a, b, c (Å), α, β, γ (°) 55.657, 73.032, 114.269, 90.00, 90.00, 90.00
R / Rfree (%) 21.9 / 27.5

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Bacillus Thuringiensis Parm with Adp (pdb code 4xe8). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Bacillus Thuringiensis Parm with Adp, PDB code: 4xe8:

Magnesium binding site 1 out of 1 in 4xe8

Go back to Magnesium Binding Sites List in 4xe8
Magnesium binding site 1 out of 1 in the Bacillus Thuringiensis Parm with Adp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Bacillus Thuringiensis Parm with Adp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg500

b:29.4
occ:1.00
O3B A:ADP501 2.0 12.4 1.0
O A:HOH717 2.0 38.9 1.0
O A:HOH664 2.1 61.7 1.0
O A:HOH622 2.2 16.4 1.0
O A:HOH647 2.2 25.8 1.0
O A:HOH623 2.3 14.7 1.0
PB A:ADP501 3.2 25.9 1.0
O2B A:ADP501 3.5 20.7 1.0
OD2 A:ASP16 3.5 36.6 1.0
NZ A:LYS23 3.6 19.1 1.0
O A:HOH732 3.8 40.1 1.0
CE A:LYS23 3.9 25.7 1.0
OD2 A:ASP236 4.1 28.2 1.0
O1B A:ADP501 4.2 30.2 1.0
O2A A:ADP501 4.2 21.5 1.0
OD1 A:ASP236 4.3 35.7 1.0
OD1 A:ASP16 4.3 35.7 1.0
CG A:ASP16 4.3 32.8 1.0
O3A A:ADP501 4.3 26.9 1.0
CG A:ASP236 4.4 28.8 1.0
PA A:ADP501 4.7 18.9 1.0
O A:HOH628 4.8 22.1 1.0
CA A:GLY238 5.0 29.3 1.0

Reference:

S.M.Jiang, A.Narita, D.Popp, U.Ghoshdastider, L.J.Lee, R.Srinivasan, M.K.Balasubramanian, T.Oda, F.J.Koh, M.Larsson, R.C.Robinson. A Novel Plasmid-Segregating Actin-Like Protein From Bacillus Thuringiensis Forms Dynamically Unstable Tubules To Be Published.
Page generated: Tue Aug 20 15:28:16 2024

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