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Magnesium in PDB 4xhp: Bacillus Thuringiensis Parm Hybrid Protein with Adp, Containing Two Parm Mutants

Protein crystallography data

The structure of Bacillus Thuringiensis Parm Hybrid Protein with Adp, Containing Two Parm Mutants, PDB code: 4xhp was solved by S.M.Jiang, R.C.Robinson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 27.75 / 3.20
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 55.306, 97.275, 87.898, 90.00, 98.82, 90.00
R / Rfree (%) 22.9 / 28.7

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Bacillus Thuringiensis Parm Hybrid Protein with Adp, Containing Two Parm Mutants (pdb code 4xhp). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Bacillus Thuringiensis Parm Hybrid Protein with Adp, Containing Two Parm Mutants, PDB code: 4xhp:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 4xhp

Go back to Magnesium Binding Sites List in 4xhp
Magnesium binding site 1 out of 2 in the Bacillus Thuringiensis Parm Hybrid Protein with Adp, Containing Two Parm Mutants


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Bacillus Thuringiensis Parm Hybrid Protein with Adp, Containing Two Parm Mutants within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg900

b:53.9
occ:1.00
NZ A:LYS23 2.5 59.7 1.0
O2B A:ADP901 2.6 0.5 1.0
OD1 A:ASP236 2.8 66.5 1.0
OD2 A:ASP16 3.1 52.2 1.0
CE A:LYS23 3.4 58.0 1.0
CG A:ASP236 3.4 62.1 1.0
OD2 A:ASP236 3.4 61.1 1.0
O1B A:ADP901 3.5 99.3 1.0
PB A:ADP901 3.5 89.8 1.0
CG A:ASP16 4.3 51.2 1.0
O3B A:ADP901 4.5 75.3 1.0
OG1 A:THR403 4.5 60.5 1.0
CD A:LYS23 4.7 52.0 1.0
CB A:ASP236 4.7 57.5 1.0
O3A A:ADP901 4.8 0.5 1.0
OD1 A:ASP16 4.8 54.0 1.0
O A:ALA400 4.9 49.6 1.0
CB A:THR403 4.9 49.6 1.0

Magnesium binding site 2 out of 2 in 4xhp

Go back to Magnesium Binding Sites List in 4xhp
Magnesium binding site 2 out of 2 in the Bacillus Thuringiensis Parm Hybrid Protein with Adp, Containing Two Parm Mutants


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Bacillus Thuringiensis Parm Hybrid Protein with Adp, Containing Two Parm Mutants within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg902

b:57.0
occ:1.00
O1B A:ADP903 2.1 73.1 1.0
O2A A:ADP903 2.6 54.9 1.0
NZ A:LYS466 2.9 52.9 1.0
OD2 A:ASP679 2.9 58.6 1.0
PB A:ADP903 3.5 79.2 1.0
PA A:ADP903 3.5 62.5 1.0
OD1 A:ASP679 3.6 52.4 1.0
CG A:ASP679 3.7 56.5 1.0
O3A A:ADP903 3.9 71.8 1.0
O1A A:ADP903 4.0 61.0 1.0
O2B A:ADP903 4.3 63.9 1.0
CE A:LYS466 4.3 48.2 1.0
OD2 A:ASP459 4.4 50.5 1.0
CA A:GLY814 4.4 49.2 1.0
O A:ALA843 4.5 47.8 1.0
CA A:GLY681 4.5 53.7 1.0
O3B A:ADP903 4.6 95.7 1.0
CD A:LYS466 4.7 46.2 1.0
N A:GLY815 4.8 46.5 1.0
O5' A:ADP903 5.0 57.2 1.0
O A:LEU680 5.0 52.4 1.0

Reference:

S.M.Jiang, A.Narita, D.Popp, U.Ghoshdastider, L.J.Lee, R.Srinivasan, M.K.Balasubramanian, T.Oda, F.J.Koh, M.Larsson, R.C.Robinson. A Novel Plasmid-Segregating Actin-Like Protein From Bacillus Thuringiensis Forms Dynamically Unstable Tubules To Be Published.
Page generated: Tue Aug 20 15:31:17 2024

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