Atomistry » Magnesium » PDB 4xgr-4xtj » 4xsh
Atomistry »
  Magnesium »
    PDB 4xgr-4xtj »
      4xsh »

Magnesium in PDB 4xsh: The Complex Structure of C3CER Exoenzyme and Gtp Bound Rhoa (Nadh- Bound State)

Protein crystallography data

The structure of The Complex Structure of C3CER Exoenzyme and Gtp Bound Rhoa (Nadh- Bound State), PDB code: 4xsh was solved by A.Toda, T.Tsurumura, T.Yoshida, H.Tsuge, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.56 / 2.50
Space group P 32
Cell size a, b, c (Å), α, β, γ (°) 50.424, 50.424, 136.667, 90.00, 90.00, 120.00
R / Rfree (%) 19 / 25.4

Magnesium Binding Sites:

The binding sites of Magnesium atom in the The Complex Structure of C3CER Exoenzyme and Gtp Bound Rhoa (Nadh- Bound State) (pdb code 4xsh). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the The Complex Structure of C3CER Exoenzyme and Gtp Bound Rhoa (Nadh- Bound State), PDB code: 4xsh:

Magnesium binding site 1 out of 1 in 4xsh

Go back to Magnesium Binding Sites List in 4xsh
Magnesium binding site 1 out of 1 in the The Complex Structure of C3CER Exoenzyme and Gtp Bound Rhoa (Nadh- Bound State)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of The Complex Structure of C3CER Exoenzyme and Gtp Bound Rhoa (Nadh- Bound State) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg202

b:50.2
occ:1.00
O A:HOH307 1.8 43.7 1.0
O2G A:GSP201 1.9 58.5 1.0
O1B A:GSP201 2.0 56.8 1.0
O A:THR37 2.1 54.5 1.0
OG1 A:THR19 2.1 41.0 1.0
O A:HOH310 2.4 41.2 1.0
PG A:GSP201 3.2 65.8 1.0
PB A:GSP201 3.2 53.0 1.0
C A:THR37 3.3 51.5 1.0
CB A:THR19 3.3 43.6 1.0
O3B A:GSP201 3.4 58.6 1.0
O3G A:GSP201 3.9 60.4 1.0
OD2 A:ASP59 4.0 54.2 1.0
CA A:THR37 4.0 56.0 1.0
N A:THR19 4.0 43.1 1.0
O2B A:GSP201 4.1 45.5 1.0
OD1 A:ASP59 4.1 51.9 1.0
O1A A:GSP201 4.2 46.1 1.0
O A:PRO36 4.2 57.2 1.0
CA A:THR19 4.2 40.6 1.0
CG2 A:THR19 4.3 45.8 1.0
N A:VAL38 4.3 51.1 1.0
O3A A:GSP201 4.4 51.6 1.0
O A:THR60 4.4 41.2 1.0
CG A:ASP59 4.5 50.4 1.0
CA A:VAL38 4.5 51.4 1.0
PA A:GSP201 4.7 50.1 1.0
S1G A:GSP201 4.7 71.8 1.0
O2A A:GSP201 4.8 51.9 1.0
CB A:LYS18 4.9 42.7 1.0
CE A:LYS18 4.9 44.8 1.0
CB A:THR37 5.0 63.1 1.0

Reference:

A.Toda, T.Tsurumura, T.Yoshida, Y.Tsumori, H.Tsuge. Rho Gtpase Recognition By C3 Exoenzyme Based on C3-Rhoa Complex Structure. J.Biol.Chem. V. 290 19423 2015.
ISSN: ESSN 1083-351X
PubMed: 26067270
DOI: 10.1074/JBC.M115.653220
Page generated: Tue Aug 20 15:36:59 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy