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Atomistry » Magnesium » PDB 4y8o-4yf4 » 4yes | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Atomistry » Magnesium » PDB 4y8o-4yf4 » 4yes » |
Magnesium in PDB 4yes: Thrombin in Complex with (S)-(4-Chloro-2-((1-(5-Methyl-1H-Pyrrole-2- Carbonyl)Pyrrolidine-2-Carboxamido)Methyl)Phenyl)MethanaminiumEnzymatic activity of Thrombin in Complex with (S)-(4-Chloro-2-((1-(5-Methyl-1H-Pyrrole-2- Carbonyl)Pyrrolidine-2-Carboxamido)Methyl)Phenyl)Methanaminium
All present enzymatic activity of Thrombin in Complex with (S)-(4-Chloro-2-((1-(5-Methyl-1H-Pyrrole-2- Carbonyl)Pyrrolidine-2-Carboxamido)Methyl)Phenyl)Methanaminium:
3.4.21.5; Protein crystallography data
The structure of Thrombin in Complex with (S)-(4-Chloro-2-((1-(5-Methyl-1H-Pyrrole-2- Carbonyl)Pyrrolidine-2-Carboxamido)Methyl)Phenyl)Methanaminium, PDB code: 4yes
was solved by
P.Orth,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Other elements in 4yes:
The structure of Thrombin in Complex with (S)-(4-Chloro-2-((1-(5-Methyl-1H-Pyrrole-2- Carbonyl)Pyrrolidine-2-Carboxamido)Methyl)Phenyl)Methanaminium also contains other interesting chemical elements:
Magnesium Binding Sites:
The binding sites of Magnesium atom in the Thrombin in Complex with (S)-(4-Chloro-2-((1-(5-Methyl-1H-Pyrrole-2- Carbonyl)Pyrrolidine-2-Carboxamido)Methyl)Phenyl)Methanaminium
(pdb code 4yes). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Thrombin in Complex with (S)-(4-Chloro-2-((1-(5-Methyl-1H-Pyrrole-2- Carbonyl)Pyrrolidine-2-Carboxamido)Methyl)Phenyl)Methanaminium, PDB code: 4yes: Magnesium binding site 1 out of 1 in 4yesGo back to![]() ![]()
Magnesium binding site 1 out
of 1 in the Thrombin in Complex with (S)-(4-Chloro-2-((1-(5-Methyl-1H-Pyrrole-2- Carbonyl)Pyrrolidine-2-Carboxamido)Methyl)Phenyl)Methanaminium
![]() Mono view ![]() Stereo pair view
Reference:
H.R.Chobanian,
B.Pio,
Y.Guo,
H.Shen,
M.A.Huffman,
M.Madeira,
G.Salituro,
J.L.Terebetski,
J.Ormes,
N.Jochnowitz,
L.Hoos,
Y.Zhou,
D.Lewis,
B.Hawes,
L.Mitnaul,
K.O'neill,
K.Ellsworth,
L.Wang,
T.Biftu,
J.L.Duffy.
Improved Stability of Proline-Derived Direct Thrombin Inhibitors Through Hydroxyl to Heterocycle Replacement. Acs Med.Chem.Lett. V. 6 553 2015.
Page generated: Sat Sep 28 23:15:17 2024
ISSN: ISSN 1948-5875 PubMed: 26005532 DOI: 10.1021/ACSMEDCHEMLETT.5B00047 |
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