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Magnesium in PDB 5a99: Crystal Structure of Operophtera Brumata CPV19 Polyhedra

Protein crystallography data

The structure of Crystal Structure of Operophtera Brumata CPV19 Polyhedra, PDB code: 5a99 was solved by X.Ji, D.Axford, R.Owen, G.Evans, H.M.Ginn, G.Sutton, D.I.Stuart, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 41.935 / 1.51
Space group I 2 3
Cell size a, b, c (Å), α, β, γ (°) 102.720, 102.720, 102.720, 90.00, 90.00, 90.00
R / Rfree (%) 16.63 / 22.81

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Operophtera Brumata CPV19 Polyhedra (pdb code 5a99). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Operophtera Brumata CPV19 Polyhedra, PDB code: 5a99:

Magnesium binding site 1 out of 1 in 5a99

Go back to Magnesium Binding Sites List in 5a99
Magnesium binding site 1 out of 1 in the Crystal Structure of Operophtera Brumata CPV19 Polyhedra


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Operophtera Brumata CPV19 Polyhedra within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1251

b:17.8
occ:1.00
O A:HOH2233 2.1 14.6 1.0
O1G A:ATP1250 2.1 14.9 1.0
O1B A:ATP1250 2.2 13.1 1.0
PG A:ATP1250 3.3 15.1 1.0
PB A:ATP1250 3.3 14.1 1.0
O3B A:ATP1250 3.7 17.9 1.0
O3G A:ATP1250 3.7 20.0 1.0
O2B A:ATP1250 4.2 12.6 1.0
O2G A:ATP1250 4.6 13.9 1.0
O3A A:ATP1250 4.6 14.5 1.0
O1A A:ATP1250 4.9 20.3 1.0

Reference:

X.Ji, D.Axford, R.Owen, G.Evans, H.M.Ginn, G.Sutton, D.I.Stuart. Polyhedra Structures and the Evolution of the Insect Viruses. J.Struct.Biol. V. 192 88 2015.
ISSN: ISSN 1047-8477
PubMed: 26291392
DOI: 10.1016/J.JSB.2015.08.009
Page generated: Sun Sep 29 00:21:27 2024

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