Magnesium in PDB 5axu: Crystal Structure of Cypovirus Polyhedra R13A Mutant

The structure of Crystal Structure of Cypovirus Polyhedra R13A Mutant, PDB code: 5axu was solved by S.Abe, H.Ijiri, H.Negishi, H.Yamanaka, K.Sasaki, K.Hirata, H.Mori, T.Ueno, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	32.64 / 1.60
Space group	I 2 3
Cell size a, b, c (Å), α, β, γ (°)	103.229, 103.229, 103.229, 90.00, 90.00, 90.00
R / Rfree (%)	16 / 18.9

The binding sites of Magnesium atom in the Crystal Structure of Cypovirus Polyhedra R13A Mutant (pdb code 5axu). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Cypovirus Polyhedra R13A Mutant, PDB code: 5axu:

Magnesium binding site 1 out of 1 in the Crystal Structure of Cypovirus Polyhedra R13A Mutant


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Cypovirus Polyhedra R13A Mutant within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg301 b:53.8 occ:1.00 O2B A:ATP302 2.2 36.0 1.0 O3G A:ATP302 2.5 42.3 1.0 O2A A:ATP302 2.6 40.7 1.0 PB A:ATP302 3.5 37.7 1.0 PG A:ATP302 3.6 42.8 1.0 PA A:ATP302 3.8 39.9 1.0 O2G A:ATP302 3.9 41.7 1.0 O3B A:ATP302 4.0 40.1 1.0 O3A A:ATP302 4.0 38.1 1.0 NZ A:LYS152 4.7 13.4 1.0 O1A A:ATP302 4.7 38.8 1.0 O1B A:ATP302 4.8 33.5 1.0 O1G A:ATP302 4.9 42.2 1.0 O5' A:ATP302 5.0 42.2 1.0

S.Abe, H.Ijiri, H.Negishi, H.Yamanaka, K.Sasaki, K.Hirata, H.Mori, T.Ueno. Design of Enzyme-Encapsulated Protein Containers By in Vivo Crystal Engineering Adv. Mater. Weinheim V. 27 7951 2015.
ISSN: ISSN 1521-4095
PubMed: 26503073
DOI: 10.1002/ADMA.201503827