Atomistry » Magnesium » PDB 5grf-5h2f » 5gvx
Atomistry »
  Magnesium »
    PDB 5grf-5h2f »
      5gvx »

Magnesium in PDB 5gvx: Structural Insight Into Dephosphorylation By Trehalose 6-Phosphate Phosphatase (OTSB2) From Mycobacterium Tuberculosis

Enzymatic activity of Structural Insight Into Dephosphorylation By Trehalose 6-Phosphate Phosphatase (OTSB2) From Mycobacterium Tuberculosis

All present enzymatic activity of Structural Insight Into Dephosphorylation By Trehalose 6-Phosphate Phosphatase (OTSB2) From Mycobacterium Tuberculosis:
3.1.3.12;

Protein crystallography data

The structure of Structural Insight Into Dephosphorylation By Trehalose 6-Phosphate Phosphatase (OTSB2) From Mycobacterium Tuberculosis, PDB code: 5gvx was solved by S.Shan, H.Min, T.Liu, D.Jiang, Z.Rao, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.76 / 2.60
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 41.669, 89.069, 105.480, 90.00, 90.00, 90.00
R / Rfree (%) 21.2 / 25.8

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structural Insight Into Dephosphorylation By Trehalose 6-Phosphate Phosphatase (OTSB2) From Mycobacterium Tuberculosis (pdb code 5gvx). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structural Insight Into Dephosphorylation By Trehalose 6-Phosphate Phosphatase (OTSB2) From Mycobacterium Tuberculosis, PDB code: 5gvx:

Magnesium binding site 1 out of 1 in 5gvx

Go back to Magnesium Binding Sites List in 5gvx
Magnesium binding site 1 out of 1 in the Structural Insight Into Dephosphorylation By Trehalose 6-Phosphate Phosphatase (OTSB2) From Mycobacterium Tuberculosis


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structural Insight Into Dephosphorylation By Trehalose 6-Phosphate Phosphatase (OTSB2) From Mycobacterium Tuberculosis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg401

b:25.0
occ:0.00
OD1 A:ASP330 1.9 26.6 1.0
O A:ASP149 1.9 25.4 1.0
O A:HOH504 2.1 23.3 1.0
OD2 A:ASP147 2.4 25.9 1.0
O A:HOH501 2.6 30.0 1.0
CG A:ASP330 2.8 27.1 1.0
C A:ASP149 3.1 22.5 1.0
OD2 A:ASP330 3.2 37.5 1.0
CG A:ASP147 3.4 25.4 1.0
OD1 A:ASP147 3.7 21.9 1.0
CA A:ASP149 4.0 22.7 1.0
CB A:ASP149 4.0 20.4 1.0
CB A:ASP330 4.1 22.8 1.0
N A:GLY150 4.1 23.8 1.0
N A:ASP149 4.2 22.6 1.0
CA A:GLY150 4.3 25.1 1.0
OD2 A:ASP334 4.6 27.7 1.0
CB A:ASP331 4.7 28.4 1.0
CB A:ASP147 4.7 22.4 1.0
C A:GLY150 5.0 26.2 1.0

Reference:

S.Shan, H.Min, T.Liu, D.Jiang, Z.Rao. Structural Insight Into Dephosphorylation By Trehalose 6-Phosphate Phosphatase (OTSB2) From Mycobacterium Tuberculosis. Faseb J. V. 30 3989 2016.
ISSN: ESSN 1530-6860
PubMed: 27572957
DOI: 10.1096/FJ.201600463R
Page generated: Sun Sep 29 15:28:03 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy