Atomistry » Magnesium » PDB 5h2q-5hia » 5he9
Atomistry »
  Magnesium »
    PDB 5h2q-5hia »
      5he9 »

Magnesium in PDB 5he9: Bacterial Initiation Protein in Complex with Phage Inhibitor Protein

Protein crystallography data

The structure of Bacterial Initiation Protein in Complex with Phage Inhibitor Protein, PDB code: 5he9 was solved by I.V.Hood, J.M.Berger, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.76 / 1.90
Space group P 65 2 2
Cell size a, b, c (Å), α, β, γ (°) 73.173, 73.173, 189.727, 90.00, 90.00, 120.00
R / Rfree (%) 18.2 / 21.8

Other elements in 5he9:

The structure of Bacterial Initiation Protein in Complex with Phage Inhibitor Protein also contains other interesting chemical elements:

Fluorine (F) 3 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Bacterial Initiation Protein in Complex with Phage Inhibitor Protein (pdb code 5he9). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Bacterial Initiation Protein in Complex with Phage Inhibitor Protein, PDB code: 5he9:

Magnesium binding site 1 out of 1 in 5he9

Go back to Magnesium Binding Sites List in 5he9
Magnesium binding site 1 out of 1 in the Bacterial Initiation Protein in Complex with Phage Inhibitor Protein


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Bacterial Initiation Protein in Complex with Phage Inhibitor Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg403

b:20.0
occ:1.00
F2 A:BEF402 1.9 22.8 1.0
O A:HOH576 2.1 12.2 1.0
O2B A:ADP401 2.1 21.5 1.0
OG A:SER171 2.1 17.5 1.0
O A:HOH514 2.2 16.2 1.0
O E:HOH116 2.2 18.1 1.0
HB2 A:SER171 3.1 22.5 1.0
CB A:SER171 3.2 18.7 1.0
BE A:BEF402 3.2 26.6 1.0
PB A:ADP401 3.3 24.2 1.0
H A:SER171 3.4 25.2 1.0
O3B A:ADP401 3.5 23.0 1.0
HB3 A:SER171 3.8 22.5 1.0
HG A:SER258 4.0 23.5 1.0
N A:SER171 4.0 21.0 1.0
HZ2 E:LYS39 4.1 39.1 1.0
HZ1 E:LYS39 4.1 39.1 1.0
O A:HOH565 4.1 17.5 1.0
F3 A:BEF402 4.1 21.9 1.0
OD1 A:ASP225 4.1 26.9 1.0
OD2 A:ASP226 4.1 20.8 1.0
OE2 E:GLU42 4.1 27.1 1.0
O2A A:ADP401 4.2 27.5 1.0
HB2 A:LYS170 4.2 22.0 1.0
CA A:SER171 4.2 17.1 1.0
HZ3 E:LYS39 4.2 39.1 1.0
HB2 A:ASP226 4.2 20.5 1.0
O3A A:ADP401 4.3 23.0 1.0
O1B A:ADP401 4.3 24.6 1.0
HE2 A:LYS170 4.3 21.5 1.0
NZ E:LYS39 4.4 32.6 1.0
F1 A:BEF402 4.4 24.3 1.0
CG A:ASP226 4.5 21.9 1.0
HH12 E:ARG46 4.5 22.7 1.0
HA A:SER171 4.5 20.5 1.0
OE1 E:GLU42 4.5 25.3 1.0
PA A:ADP401 4.6 28.8 1.0
OG A:SER258 4.6 19.6 1.0
O1A A:ADP401 4.7 28.0 1.0
CD E:GLU42 4.8 23.7 1.0
HH11 E:ARG46 4.8 22.7 1.0
CB A:ASP226 4.9 17.1 1.0
HZ2 A:LYS170 4.9 24.7 1.0
CG A:ASP225 4.9 24.1 1.0
OD1 A:ASP226 5.0 20.9 1.0
OD2 A:ASP225 5.0 24.1 1.0
NH1 E:ARG46 5.0 18.9 1.0
HZ1 A:LYS170 5.0 24.7 1.0

Reference:

I.V.Hood, J.M.Berger. Structure of Inhibited Replicative Helicase Loader From Staphylococcus Aureus at 1.9 Angstrom Resolution To Be Published.
Page generated: Sun Sep 29 15:48:58 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy