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Magnesium in PDB 5ho5: Mamb

Protein crystallography data

The structure of Mamb, PDB code: 5ho5 was solved by N.Zeytuni, N.Keren, G.Davidov, R.Zarivach, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 68.44 / 1.99
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 37.165, 96.663, 96.913, 90.00, 90.00, 90.00
R / Rfree (%) 20.7 / 24.9

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Mamb (pdb code 5ho5). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Mamb, PDB code: 5ho5:

Magnesium binding site 1 out of 1 in 5ho5

Go back to Magnesium Binding Sites List in 5ho5
Magnesium binding site 1 out of 1 in the Mamb


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Mamb within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg301

b:28.0
occ:1.00
O B:HOH437 2.3 28.8 1.0
O B:GLU273 2.3 25.6 1.0
C B:GLU273 3.4 25.7 1.0
O B:HOH406 4.2 30.9 1.0
CA B:GLU273 4.2 20.9 1.0
N B:ALA274 4.3 20.6 1.0
O B:HOH444 4.4 30.6 1.0
CA B:ALA274 4.5 19.8 1.0
CB B:GLU273 4.5 24.0 1.0
O B:ALA274 4.8 21.0 1.0
C B:ALA274 4.8 19.4 1.0
O B:VAL276 5.0 26.8 1.0

Reference:

R.Uebe, N.Keren-Khadmy, N.Zeytuni, E.Katzmann, Y.Navon, G.Davidov, R.Bitton, J.M.Plitzko, D.Schuler, R.Zarivach. The Dual Role of Mamb in Magnetosome Membrane Assembly and Magnetite Biomineralization. Mol. Microbiol. V. 107 542 2018.
ISSN: ESSN 1365-2958
PubMed: 29243866
DOI: 10.1111/MMI.13899
Page generated: Sun Sep 29 16:03:26 2024

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