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Magnesium in PDB 5hsg: Crystal Structure of An Abc Transporter Solute Binding Protein From Klebsiella Pneumoniae (KPN_01730, Target Efi-511059), Apo Open Structure

Protein crystallography data

The structure of Crystal Structure of An Abc Transporter Solute Binding Protein From Klebsiella Pneumoniae (KPN_01730, Target Efi-511059), Apo Open Structure, PDB code: 5hsg was solved by Y.Roth, M.W.Vetting, N.F.Al Obaidi, R.Toro, L.L.Morisco, J.Benach, J.Koss, S.R.Wasserman, J.A.Gerlt, S.C.Almo, Enzyme Function Initiative (Efi), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.73 / 1.30
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 39.548, 48.800, 157.115, 90.00, 90.00, 90.00
R / Rfree (%) 15 / 17.4

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of An Abc Transporter Solute Binding Protein From Klebsiella Pneumoniae (KPN_01730, Target Efi-511059), Apo Open Structure (pdb code 5hsg). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of An Abc Transporter Solute Binding Protein From Klebsiella Pneumoniae (KPN_01730, Target Efi-511059), Apo Open Structure, PDB code: 5hsg:

Magnesium binding site 1 out of 1 in 5hsg

Go back to Magnesium Binding Sites List in 5hsg
Magnesium binding site 1 out of 1 in the Crystal Structure of An Abc Transporter Solute Binding Protein From Klebsiella Pneumoniae (KPN_01730, Target Efi-511059), Apo Open Structure


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of An Abc Transporter Solute Binding Protein From Klebsiella Pneumoniae (KPN_01730, Target Efi-511059), Apo Open Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg401

b:55.8
occ:1.00
HZ3 A:LYS153 2.1 62.0 1.0
OD2 A:ASP149 2.3 22.7 1.0
O A:HOH816 2.5 45.6 1.0
HB3 A:ASP149 2.6 21.9 1.0
NZ A:LYS153 2.8 51.7 1.0
HZ1 A:LYS153 2.8 62.0 1.0
HZ2 A:LYS153 3.0 62.0 1.0
CG A:ASP149 3.1 24.3 1.0
CB A:ASP149 3.1 18.2 1.0
HB2 A:ASP149 3.2 21.9 1.0
O A:HOH641 3.7 35.2 1.0
CE A:LYS153 4.1 50.2 1.0
HD2 A:LYS153 4.1 62.5 1.0
HE2 A:LYS153 4.2 60.2 1.0
OD1 A:ASP149 4.3 24.3 1.0
O A:HOH868 4.3 31.7 1.0
CA A:ASP149 4.5 16.5 1.0
O A:HOH509 4.6 35.0 1.0
CD A:LYS153 4.7 52.1 1.0
HE3 A:LYS153 4.8 60.2 1.0
HA A:ASP149 4.8 19.8 1.0
HD1 A:TYR146 4.9 23.0 1.0
HA A:TYR146 4.9 16.4 1.0

Reference:

Y.Roth, M.W.Vetting, N.F.Al Obaidi, R.Toro, L.L.Morisco, J.Benach, J.Koss, S.R.Wasserman, J.A.Gerlt, S.C.Almo, Enzyme Function Initiative (Efi). Crystal Structure of An Abc Transporter Solute Binding Protein From Klebsiella Pneumoniae (KPN_01730, Target Efi-511059), Apo Open Structure To Be Published.
Page generated: Sun Sep 29 16:33:40 2024

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