Atomistry » Magnesium » PDB 5j2p-5jca » 5jb3
Atomistry »
  Magnesium »
    PDB 5j2p-5jca »
      5jb3 »

Magnesium in PDB 5jb3: Cryo-Em Structure of A Full Archaeal Ribosomal Translation Initiation Complex in the P-Remote Conformation

Other elements in 5jb3:

The structure of Cryo-Em Structure of A Full Archaeal Ribosomal Translation Initiation Complex in the P-Remote Conformation also contains other interesting chemical elements:

Zinc (Zn) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Cryo-Em Structure of A Full Archaeal Ribosomal Translation Initiation Complex in the P-Remote Conformation (pdb code 5jb3). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Cryo-Em Structure of A Full Archaeal Ribosomal Translation Initiation Complex in the P-Remote Conformation, PDB code: 5jb3:

Magnesium binding site 1 out of 1 in 5jb3

Go back to Magnesium Binding Sites List in 5jb3
Magnesium binding site 1 out of 1 in the Cryo-Em Structure of A Full Archaeal Ribosomal Translation Initiation Complex in the P-Remote Conformation


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cryo-Em Structure of A Full Archaeal Ribosomal Translation Initiation Complex in the P-Remote Conformation within 5.0Å range:
probe atom residue distance (Å) B Occ
7:Mg502

b:40.0
occ:1.00
O1B 7:GNP503 1.8 40.0 1.0
O2G 7:GNP503 1.9 40.0 1.0
N3B 7:GNP503 2.0 40.0 1.0
PG 7:GNP503 2.2 40.0 1.0
PB 7:GNP503 2.3 40.0 1.0
OG1 7:THR23 2.3 40.0 1.0
O1G 7:GNP503 2.9 40.0 1.0
O1A 7:GNP503 3.2 40.0 1.0
CB 7:THR23 3.3 40.0 1.0
O2B 7:GNP503 3.4 40.0 1.0
O3A 7:GNP503 3.4 40.0 1.0
N 7:THR23 3.5 40.0 1.0
PA 7:GNP503 3.5 40.0 1.0
O2A 7:GNP503 3.6 40.0 1.0
O3G 7:GNP503 3.7 40.0 1.0
OD2 7:ASP93 4.0 40.0 1.0
CA 7:THR23 4.0 40.0 1.0
CB 7:THR46 4.2 40.0 1.0
N 7:LYS22 4.3 40.0 1.0
OG1 7:THR46 4.3 40.0 1.0
CB 7:LYS22 4.4 40.0 1.0
C 7:LYS22 4.5 40.0 1.0
CG2 7:THR23 4.5 40.0 1.0
CA 7:LYS22 4.6 40.0 1.0
CE 7:LYS22 4.7 40.0 1.0
N 7:THR46 4.7 40.0 1.0
CG 7:ASP93 4.9 40.0 1.0
OD1 7:ASP93 5.0 40.0 1.0

Reference:

P.D.Coureux, C.Lazennec-Schurdevin, A.Monestier, E.Larquet, L.Cladiere, B.P.Klaholz, E.Schmitt, Y.Mechulam. Cryo-Em Study of Start Codon Selection During Archaeal Translation Initiation. Nat Commun V. 7 13366 2016.
ISSN: ESSN 2041-1723
PubMed: 27819266
DOI: 10.1038/NCOMMS13366
Page generated: Sun Sep 29 17:41:28 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy