Magnesium in PDB 5nd3: Microtubule-Bound MKLP2 Motor Domain in the with No Nucleotide

The binding sites of Magnesium atom in the Microtubule-Bound MKLP2 Motor Domain in the with No Nucleotide (pdb code 5nd3). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Microtubule-Bound MKLP2 Motor Domain in the with No Nucleotide, PDB code: 5nd3:

Magnesium binding site 1 out of 1 in the Microtubule-Bound MKLP2 Motor Domain in the with No Nucleotide


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Microtubule-Bound MKLP2 Motor Domain in the with No Nucleotide within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg501 b:18.6 occ:1.00 O2G A:GTP500 2.4 28.7 1.0 CB A:GLN11 2.7 0.0 1.0 O2B A:GTP500 3.2 41.2 1.0 CG A:GLN11 3.5 0.0 1.0 OE1 A:GLN11 3.5 0.0 1.0 PG A:GTP500 3.7 30.0 1.0 O3B A:GTP500 3.7 35.2 1.0 CA A:GLN11 3.7 0.0 1.0 CD A:GLN11 3.7 0.0 1.0 N A:GLN11 3.7 0.0 1.0 PB A:GTP500 3.8 41.4 1.0 OD1 A:ASP69 4.1 0.0 1.0 O3A A:GTP500 4.1 39.2 1.0 OD2 A:ASP69 4.3 0.0 1.0 CG2 A:VAL74 4.3 0.0 1.0 O1A A:GTP500 4.4 44.5 1.0 O1G A:GTP500 4.5 35.0 1.0 CG A:ASP69 4.6 0.0 1.0 CB A:GLU71 4.8 0.0 1.0 ND2 B:ASN249 4.8 0.0 1.0 NE2 A:GLN11 4.8 0.0 1.0 PA A:GTP500 4.8 41.3 1.0 O3G A:GTP500 4.9 32.1 1.0 O B:ASN249 4.9 0.0 1.0 C A:GLY10 5.0 0.0 1.0

J.Atherton, I.M.Yu, A.Cook, J.M.Muretta, A.Joseph, J.Major, Y.Sourigues, J.Clause, M.Topf, S.S.Rosenfeld, A.Houdusse, C.A.Moores. The Divergent Mitotic Kinesin MKLP2 Exhibits Atypical Structure and Mechanochemistry. Elife V. 6 2017.
ISSN: ESSN 2050-084X
PubMed: 28826477
DOI: 10.7554/ELIFE.27793