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Magnesium in PDB 5upk: CDC42 Binds PAK4 Via An Extended Gtpase-Effector Interface - 3 Peptide: PAK4CAT, PAK4-N45, CDC42

Enzymatic activity of CDC42 Binds PAK4 Via An Extended Gtpase-Effector Interface - 3 Peptide: PAK4CAT, PAK4-N45, CDC42

All present enzymatic activity of CDC42 Binds PAK4 Via An Extended Gtpase-Effector Interface - 3 Peptide: PAK4CAT, PAK4-N45, CDC42:
2.7.11.1;

Protein crystallography data

The structure of CDC42 Binds PAK4 Via An Extended Gtpase-Effector Interface - 3 Peptide: PAK4CAT, PAK4-N45, CDC42, PDB code: 5upk was solved by B.H.Ha, T.J.Boggon, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.01 / 2.40
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 58.465, 61.621, 85.791, 90.00, 91.57, 90.00
R / Rfree (%) 21.8 / 26.4

Magnesium Binding Sites:

The binding sites of Magnesium atom in the CDC42 Binds PAK4 Via An Extended Gtpase-Effector Interface - 3 Peptide: PAK4CAT, PAK4-N45, CDC42 (pdb code 5upk). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the CDC42 Binds PAK4 Via An Extended Gtpase-Effector Interface - 3 Peptide: PAK4CAT, PAK4-N45, CDC42, PDB code: 5upk:

Magnesium binding site 1 out of 1 in 5upk

Go back to Magnesium Binding Sites List in 5upk
Magnesium binding site 1 out of 1 in the CDC42 Binds PAK4 Via An Extended Gtpase-Effector Interface - 3 Peptide: PAK4CAT, PAK4-N45, CDC42


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of CDC42 Binds PAK4 Via An Extended Gtpase-Effector Interface - 3 Peptide: PAK4CAT, PAK4-N45, CDC42 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg201

b:72.3
occ:1.00
 O2A C:GNP200 2.3 65.8 1.0
OG1 C:THR35 2.4 65.8 1.0
O1B C:GNP200 2.6 68.9 1.0
OG1 C:THR17 2.6 76.9 1.0
O1G C:GNP200 2.7 76.1 1.0
O C:VAL33 2.9 86.7 1.0
CB C:THR17 3.4 76.0 1.0
N C:THR35 3.5 72.4 1.0
PB C:GNP200 3.6 68.2 1.0
PA C:GNP200 3.6 71.8 1.0
CB C:THR35 3.7 66.2 1.0
N3B C:GNP200 3.7 70.8 1.0
PG C:GNP200 3.8 71.3 1.0
CA C:THR35 4.0 68.5 1.0
O3A C:GNP200 4.1 71.0 1.0
C C:PRO34 4.1 77.4 1.0
C C:VAL33 4.1 87.1 1.0
CG2 C:THR17 4.1 76.3 1.0
O1A C:GNP200 4.3 73.3 1.0
CA C:PRO34 4.4 81.5 1.0
O C:HOH301 4.6 65.2 1.0
CE2 C:TYR32 4.6 93.9 1.0
CA C:THR17 4.6 75.4 1.0
N C:THR17 4.7 74.5 1.0
N C:PRO34 4.7 85.1 1.0
O3G C:GNP200 4.8 75.7 1.0
O5' C:GNP200 4.8 75.4 1.0
CG2 C:THR35 4.8 65.1 1.0
O C:PRO34 4.9 78.2 1.0
O2B C:GNP200 4.9 66.8 1.0
O2G C:GNP200 5.0 73.0 1.0
OD2 C:ASP57 5.0 60.2 1.0

Reference:

B.H.Ha, T.J.Boggon. CDC42 Binds PAK4 Via An Extended Gtpase-Effector Interface. Proc. Natl. Acad. Sci. V. 115 531 2018U.S.A..
ISSN: ESSN 1091-6490
PubMed: 29295922
DOI: 10.1073/PNAS.1717437115
Page generated: Mon Sep 30 05:23:35 2024

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