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Magnesium in PDB 5xxh: Crystal Structure Analysis of the Cbp

Enzymatic activity of Crystal Structure Analysis of the Cbp

All present enzymatic activity of Crystal Structure Analysis of the Cbp:
2.3.1.48;

Protein crystallography data

The structure of Crystal Structure Analysis of the Cbp, PDB code: 5xxh was solved by Q.Xiang, Y.Zhang, C.Wang, M.Song, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.43 / 1.62
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 44.320, 44.320, 121.292, 90.00, 90.00, 120.00
R / Rfree (%) 19.1 / 20.8

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure Analysis of the Cbp (pdb code 5xxh). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure Analysis of the Cbp, PDB code: 5xxh:

Magnesium binding site 1 out of 1 in 5xxh

Go back to Magnesium Binding Sites List in 5xxh
Magnesium binding site 1 out of 1 in the Crystal Structure Analysis of the Cbp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure Analysis of the Cbp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1203

b:18.5
occ:1.00
O A:HOH1380 2.0 17.6 1.0
O A:HOH1302 2.1 18.3 1.0
O A:HOH1346 2.1 16.0 1.0
O A:HOH1402 2.2 23.1 1.0
OE2 A:GLU1107 4.0 17.5 1.0
O A:ASP1105 4.2 15.8 1.0
O A:HOH1393 4.3 18.5 1.0
OE1 A:GLU1107 4.3 15.2 1.0
CD A:GLU1107 4.6 15.7 1.0
O A:HOH1343 4.7 27.1 1.0
CD A:PRO1106 4.7 15.8 1.0

Reference:

Q.Xiang, C.Wang, Y.Zhang, X.Xue, M.Song, C.Zhang, C.Li, C.Wu, K.Li, X.Hui, Y.Zhou, J.B.Smaill, A.V.Patterson, D.Wu, K.Ding, Y.Xu. Discovery and Optimization of 1-(1H-Indol-1-Yl)Ethanone Derivatives As Cbp/EP300 Bromodomain Inhibitors For the Treatment of Castration-Resistant Prostate Cancer. Eur J Med Chem V. 147 238 2018.
ISSN: ISSN 1768-3254
PubMed: 29448139
DOI: 10.1016/J.EJMECH.2018.01.087
Page generated: Mon Sep 30 10:37:51 2024

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