Magnesium in PDB 5znk: Crystal Structure of A Bacterial Prors with Ligands

All present enzymatic activity of Crystal Structure of A Bacterial Prors with Ligands:
6.1.1.15;

The structure of Crystal Structure of A Bacterial Prors with Ligands, PDB code: 5znk was solved by B.Cheng, Y.Yu, H.Zhou, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	50.00 / 2.07
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	129.575, 77.204, 73.965, 90.00, 99.33, 90.00
R / Rfree (%)	22.8 / 25.4

The structure of Crystal Structure of A Bacterial Prors with Ligands also contains other interesting chemical elements:

Fluorine	(F)	1 atom
Chlorine	(Cl)	1 atom

The binding sites of Magnesium atom in the Crystal Structure of A Bacterial Prors with Ligands (pdb code 5znk). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of A Bacterial Prors with Ligands, PDB code: 5znk:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Crystal Structure of A Bacterial Prors with Ligands


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of A Bacterial Prors with Ligands within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg602 b:20.4 occ:1.00 O2G A:ANP601 2.0 20.5 1.0 O A:HOH714 2.0 15.6 1.0 O A:HOH760 2.0 16.2 1.0 O A:HOH787 2.1 21.7 1.0 O A:HOH721 2.1 13.9 1.0 O2B A:ANP601 2.2 18.0 1.0 PG A:ANP601 3.2 19.5 1.0 PB A:ANP601 3.4 18.1 1.0 N3B A:ANP601 3.7 19.0 1.0 O1G A:ANP601 3.8 21.1 1.0 NH1 A:ARG140 3.8 17.1 1.0 NH1 A:ARG151 3.9 22.0 1.0 OE2 A:GLU92 4.1 30.6 1.0 OE1 A:GLU142 4.1 24.1 1.0 OE2 A:GLU142 4.2 22.9 1.0 O3G A:ANP601 4.4 19.4 1.0 O1B A:ANP601 4.5 18.1 1.0 O3A A:ANP601 4.5 17.0 1.0 N7 A:ANP601 4.5 12.0 1.0 N7 A:9G3605 4.6 19.4 1.0 CD A:GLU142 4.6 23.5 1.0 C8 A:9G3605 4.9 18.9 1.0

Magnesium binding site 2 out of 2 in the Crystal Structure of A Bacterial Prors with Ligands


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of A Bacterial Prors with Ligands within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg603 b:14.7 occ:1.00 OE1 A:GLN409 2.1 20.4 1.0 O1B A:ANP601 2.1 18.1 1.0 O A:HOH793 2.4 27.5 1.0 O1A A:ANP601 2.5 16.6 1.0 OE2 A:GLU406 2.5 20.7 1.0 O A:HOH776 2.5 34.2 1.0 PB A:ANP601 3.3 18.1 1.0 CD A:GLU406 3.3 19.8 1.0 CD A:GLN409 3.3 19.9 1.0 O3A A:ANP601 3.4 17.0 1.0 PA A:ANP601 3.4 15.9 1.0 OE1 A:GLU406 3.5 20.3 1.0 N3B A:ANP601 3.9 19.0 1.0 NE2 A:GLN409 4.1 19.8 1.0 CB A:GLN409 4.2 19.5 1.0 CZ A:PHE411 4.2 24.9 1.0 CG A:GLN409 4.3 19.9 1.0 O2A A:ANP601 4.4 15.8 1.0 CG A:GLU406 4.6 19.5 1.0 O2B A:ANP601 4.6 18.0 1.0 OE1 A:GLU209 4.6 27.0 1.0 O5' A:ANP601 4.7 15.4 1.0 O3' A:ANP601 4.7 14.0 1.0 C3' A:ANP601 4.8 13.3 1.0 C5' A:ANP601 5.0 14.1 1.0 CE2 A:PHE411 5.0 25.0 1.0

B.Cheng, S.Luo, Z.Luo, Y.Chen, Y.Yu, J.Guo, Q.Liu, H.Zhou. Crystal Structure of A Bacterial Prors with Ligands To Be Published.