Magnesium in PDB 5zw9: Crystal Structure of Pyridoxal Kinase (Pdxk) From Salmonella Typhimurium

All present enzymatic activity of Crystal Structure of Pyridoxal Kinase (Pdxk) From Salmonella Typhimurium:
2.7.1.35;

The structure of Crystal Structure of Pyridoxal Kinase (Pdxk) From Salmonella Typhimurium, PDB code: 5zw9 was solved by G.Deka, J.F.Benazir, J.N.Kalyani, H.S.Savithri, M.R.N.Murthy, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	60.33 / 2.60
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	65.110, 72.890, 107.520, 90.00, 90.00, 90.00
R / Rfree (%)	22.4 / 28.9

The binding sites of Magnesium atom in the Crystal Structure of Pyridoxal Kinase (Pdxk) From Salmonella Typhimurium (pdb code 5zw9). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Pyridoxal Kinase (Pdxk) From Salmonella Typhimurium, PDB code: 5zw9:

Magnesium binding site 1 out of 1 in the Crystal Structure of Pyridoxal Kinase (Pdxk) From Salmonella Typhimurium


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Pyridoxal Kinase (Pdxk) From Salmonella Typhimurium within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg302 b:35.5 occ:1.00 O2 A:PO4301 2.3 39.4 1.0 O A:HOH476 2.6 15.4 1.0 P A:PO4301 3.6 39.0 1.0 OD2 A:ASP237 3.8 26.9 1.0 O3 A:PO4301 4.0 39.0 1.0 CG1 A:VAL35 4.1 25.1 1.0 O1 A:PO4301 4.3 38.3 1.0 CG1 A:VAL132 4.5 28.1 1.0 OH A:TYR141 4.6 31.8 1.0 CG A:ASP237 4.6 26.8 1.0 CG2 A:VAL35 4.7 24.6 1.0 O4 A:PO4301 4.7 38.2 1.0 OD1 A:ASP237 4.8 26.5 1.0 N A:GLY234 4.9 33.0 1.0

G.Deka, J.F.Benazir, J.N.Kalyani, H.S.Savithri, M.R.N.Murthy. Crystal Structure of Pyridoxal Kinase (Pdxk) From Salmonella Typhimurium To Be Published.