Magnesium in PDB 6agp: Structure of RAC1 in the Low-Affinity State For MG2+

The binding sites of Magnesium atom in the Structure of RAC1 in the Low-Affinity State For MG2+ (pdb code 6agp). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of RAC1 in the Low-Affinity State For MG2+, PDB code: 6agp:

Magnesium binding site 1 out of 1 in the Structure of RAC1 in the Low-Affinity State For MG2+


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of RAC1 in the Low-Affinity State For MG2+ within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg202 b:0.0 occ:1.00 OG1 A:THR17 2.1 0.0 1.0 HG1 A:THR17 2.1 0.0 1.0 O2B A:GDP201 2.3 0.0 1.0 PB A:GDP201 3.3 0.0 1.0 H A:THR17 3.4 0.0 1.0 O3B A:GDP201 3.4 0.0 1.0 CB A:THR17 3.4 0.0 1.0 HOB3 A:GDP201 3.5 0.0 1.0 HB A:THR17 3.7 0.0 1.0 O2A A:GDP201 3.9 0.0 1.0 HB2 A:LYS16 3.9 0.0 1.0 HE2 A:LYS16 4.1 0.0 1.0 N A:THR17 4.1 0.0 1.0 O3A A:GDP201 4.2 0.0 1.0 HG21 A:THR17 4.2 0.0 1.0 HZ2 A:LYS16 4.2 0.0 1.0 CA A:THR17 4.3 0.0 1.0 OD2 A:ASP57 4.3 0.0 1.0 CG2 A:THR17 4.4 0.0 1.0 O1B A:GDP201 4.4 0.0 1.0 PA A:GDP201 4.5 0.0 1.0 HA A:THR17 4.6 0.0 1.0 HG23 A:THR17 4.6 0.0 1.0 OD1 A:ASP57 4.7 0.0 1.0 O1A A:GDP201 4.7 0.0 1.0 O A:THR58 4.9 0.0 1.0 CG A:ASP57 4.9 0.0 1.0

Y.Toyama, K.Kontani, T.Katada, I.Shimada. Conformational Landscape Alternations Promote Oncogenic Activities of Ras-Related C3 Botulinum Toxin Substrate 1 As Revealed By uc(Nmr). Sci Adv V. 5 V8945 2019.
ISSN: ESSN 2375-2548
PubMed: 30891502
DOI: 10.1126/SCIADV.AAV8945