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Magnesium in PDB 6b1z: Crystal Structure of Glutamate-Trna Synthetase From Elizabethkingia Anophelis

Enzymatic activity of Crystal Structure of Glutamate-Trna Synthetase From Elizabethkingia Anophelis

All present enzymatic activity of Crystal Structure of Glutamate-Trna Synthetase From Elizabethkingia Anophelis:
6.1.1.17;

Protein crystallography data

The structure of Crystal Structure of Glutamate-Trna Synthetase From Elizabethkingia Anophelis, PDB code: 6b1z was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.44 / 1.60
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 47.170, 99.780, 132.590, 90.00, 90.00, 90.00
R / Rfree (%) 17.8 / 21.1

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Glutamate-Trna Synthetase From Elizabethkingia Anophelis (pdb code 6b1z). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Glutamate-Trna Synthetase From Elizabethkingia Anophelis, PDB code: 6b1z:

Magnesium binding site 1 out of 1 in 6b1z

Go back to Magnesium Binding Sites List in 6b1z
Magnesium binding site 1 out of 1 in the Crystal Structure of Glutamate-Trna Synthetase From Elizabethkingia Anophelis


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Glutamate-Trna Synthetase From Elizabethkingia Anophelis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg624

b:21.8
occ:0.43
O A:ILE176 1.9 21.7 1.0
O A:HOH916 2.0 25.5 1.0
O A:HOH831 2.1 33.4 1.0
O A:HOH816 2.2 34.9 1.0
C A:ILE176 3.0 17.7 1.0
CA A:ILE176 3.7 16.1 1.0
O A:HOH1241 3.9 33.7 1.0
O A:HOH1144 3.9 50.0 1.0
O A:ASP175 4.0 17.6 1.0
N A:ILE177 4.1 19.3 1.0
CA A:ILE177 4.4 17.1 1.0
O A:HOH904 4.4 35.9 1.0
CG2 A:ILE176 4.4 19.0 1.0
O A:ILE177 4.4 21.2 1.0
OD1 A:ASN329 4.5 32.7 1.0
C A:ILE177 4.5 19.7 1.0
O A:HOH898 4.5 24.8 1.0
CB A:ILE176 4.7 17.6 1.0
O A:HOH749 4.8 55.7 1.0
N A:ILE176 4.8 15.0 1.0
C A:ASP175 4.8 14.7 1.0
N A:GLY179 4.9 19.3 1.0
O A:HOH1048 4.9 26.2 1.0

Reference:

D.M.Dranow, D.D.Lorimer, T.E.Edwards. Crystal Structure of Glutamate-Trna Synthetase From Elizabethkingia Anophelis To Be Published.
Page generated: Mon Sep 30 19:29:15 2024

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