Magnesium in PDB 6e9f: ESCAS13D-Crrna-Target Rna Ternary Complex

The binding sites of Magnesium atom in the ESCAS13D-Crrna-Target Rna Ternary Complex (pdb code 6e9f). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the ESCAS13D-Crrna-Target Rna Ternary Complex, PDB code: 6e9f:

Magnesium binding site 1 out of 1 in the ESCAS13D-Crrna-Target Rna Ternary Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of ESCAS13D-Crrna-Target Rna Ternary Complex within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg101 b:53.5 occ:1.00 OP1 B:U23 2.1 63.1 1.0 P B:U23 3.1 63.1 1.0 O3' B:G22 3.4 62.6 1.0 OP2 B:A28 3.5 63.8 1.0 OP2 B:U23 3.6 63.1 1.0 OP2 B:U25 3.9 57.2 1.0 O A:TYR182 4.4 55.0 1.0 O5' B:U23 4.5 63.1 1.0 P B:A28 4.7 63.8 1.0 OD2 A:ASP186 4.7 52.5 1.0 OP1 B:A27 4.7 58.9 1.0 C3' B:G22 4.8 62.6 1.0 CB A:TYR182 4.8 55.0 1.0 C5' B:U23 4.9 63.1 1.0 OP2 B:A27 4.9 58.9 1.0 OP1 B:A28 5.0 63.8 1.0

C.Zhang, S.Konermann, N.J.Brideau, P.Lotfy, X.Wu, S.J.Novick, T.Strutzenberg, P.R.Griffin, P.D.Hsu, D.Lyumkis. Structural Basis For the Rna-Guided Ribonuclease Activity of Crispr-CAS13D. Cell V. 175 212 2018.
ISSN: ISSN 1097-4172
PubMed: 30241607
DOI: 10.1016/J.CELL.2018.09.001