Atomistry » Magnesium » PDB 6gom-6gtr » 6gpv
Atomistry »
  Magnesium »
    PDB 6gom-6gtr »
      6gpv »

Magnesium in PDB 6gpv: Crystal Structure of Blue-Light Irradiated Minisog

Enzymatic activity of Crystal Structure of Blue-Light Irradiated Minisog

All present enzymatic activity of Crystal Structure of Blue-Light Irradiated Minisog:
2.7.11.1;

Protein crystallography data

The structure of Crystal Structure of Blue-Light Irradiated Minisog, PDB code: 6gpv was solved by C.Lafaye, L.Signor, S.Aumonier, X.Shu, G.Gotthard, A.Royant, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.76 / 2.00
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 40.500, 40.500, 133.760, 90.00, 90.00, 90.00
R / Rfree (%) 18 / 24

Other elements in 6gpv:

The structure of Crystal Structure of Blue-Light Irradiated Minisog also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Blue-Light Irradiated Minisog (pdb code 6gpv). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Blue-Light Irradiated Minisog, PDB code: 6gpv:

Magnesium binding site 1 out of 1 in 6gpv

Go back to Magnesium Binding Sites List in 6gpv
Magnesium binding site 1 out of 1 in the Crystal Structure of Blue-Light Irradiated Minisog


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Blue-Light Irradiated Minisog within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1002

b:37.4
occ:0.75
O A:HOH1212 2.0 36.9 0.8
O A:HOH1216 2.0 31.3 0.8
O A:HOH1104 2.1 32.5 0.8
O A:HOH1116 2.1 24.1 0.8
O A:HOH1114 2.4 26.7 0.8
O2P A:FMN1001 3.9 24.6 0.8
O A:HOH1139 4.0 36.5 1.0
OE1 A:GLN44 4.3 26.9 1.0
OE1 A:GLN50 4.4 45.8 1.0
O A:HOH1157 4.4 47.2 1.0
O3P A:FMN1001 4.5 27.6 0.8
CD A:ARG41 4.6 26.9 1.0
O A:HOH1161 4.6 38.0 1.0
CG1 A:VAL53 4.7 34.2 1.0
P A:FMN1001 4.7 29.9 0.8
NH1 A:ARG57 4.8 40.0 0.5
NE A:ARG41 4.8 26.9 1.0

Reference:

J.Torra, C.Lafaye, L.Signor, S.Aumonier, C.Flors, X.Shu, S.Nonell, G.Gotthard, A.Royant. Tailing Minisog: Structural Bases of the Complex Photophysics of A Flavin-Binding Singlet Oxygen Photosensitizing Protein. Sci Rep V. 9 2428 2019.
ISSN: ESSN 2045-2322
PubMed: 30787421
DOI: 10.1038/S41598-019-38955-3
Page generated: Tue Oct 1 01:20:23 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy